From 40e5a5811c6ffce9b0974e93cdd927cbcf60c157 Mon Sep 17 00:00:00 2001
From: Joe Hunkeler <jhunkeler@gmail.com>
Date: Tue, 11 Aug 2015 16:51:37 -0400
Subject: Repatch (from linux) of OSX IRAF

---
 pkg/obsolete/doc/oimstat.hlp | 108 +++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 108 insertions(+)
 create mode 100644 pkg/obsolete/doc/oimstat.hlp

(limited to 'pkg/obsolete/doc/oimstat.hlp')

diff --git a/pkg/obsolete/doc/oimstat.hlp b/pkg/obsolete/doc/oimstat.hlp
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+.help oimstatistics Jan90 images.imutil
+.ih
+NAME
+oimstatistics -- compute and print image pixel statistics
+.ih
+USAGE	
+oimstatistics images
+.ih
+PARAMETERS
+.ls images
+Images for which pixel statistics are to be computed.
+.le
+.ls fields = "image,npix,mean,stddev,min,max"
+The statistical quantities to be computed and printed.
+.le
+.ls lower = INDEF
+Use only pixels with values greater than or equal to this limit.
+All pixels are above the default value of INDEF.
+.le
+.ls upper = INDEF
+Use only pixels with values less than or equal to this limit.
+All pixels are below the default value of INDEF.
+.le
+.ls binwidth = 0.1
+The width of the histogram bins used for computing the midpoint (estimate
+of the median) and the mode.
+The units are in sigma.
+.le
+.ls format = yes
+Label the output columns and print the result in fixed format. If format
+is "no" no column labels are printed and the output is in free format.
+.le
+.ih
+DESCRIPTION
+The statistical quantities specified by the parameter \fIfields\fR are
+computed and printed for each image in the list specified by \fIimages\fR.
+The results are printed in tabular form with the fields listed in the order
+they are specified in the fields parameter. The available fields are the
+following.
+
+.nf
+	 image - the image name
+	  npix - the number of pixels used to do the statistics
+	  mean - the mean of the pixel distribution
+	 midpt - estimate of the median of the pixel distribution
+	  mode - the mode of the pixel distribution
+	stddev - the standard deviation of the pixel distribution
+	  skew - the skew of the pixel distribution
+      kurtosis - the kurtosis of the pixel distribution
+	   min - the minimum pixel value
+	   max - the maximum pixel value
+.fi
+
+The mean, standard deviation, skew, kurtosis, min and max are computed in a
+single pass through the image using the expressions listed below.
+Only the quantities selected by the fields parameter are actually computed.
+
+.nf
+          mean = sum (x1,...,xN) / N
+	     y = x - mean
+      variance = sum (y1 ** 2,...,yN ** 2) / (N-1)
+        stddev = sqrt (variance)
+          skew = sum ((y1 / stddev) ** 3,...,(yN / stddev) ** 3) / (N-1)
+      kurtosis = sum ((y1 / stddev) ** 4,...,(yN / stddev) ** 4) / (N-1) - 3
+.fi
+
+The midpoint and mode are computed in two passes through the image. In the
+first pass the standard deviation of the pixels is calculated and used
+with the \fIbinwidth\fR parameter to compute the resolution of the data
+histogram. The midpoint is estimated by integrating the histogram and
+computing by interpolation the data value at which exactly half the
+pixels are below that data value and half are above it. The mode is
+computed by locating the maximum of the data histogram and fitting the
+peak by parabolic interpolation.
+
+.ih
+EXAMPLES
+1. To find the number of pixels, mean, standard deviation and the minimum
+and maximum pixel value of a bias region in an image.
+
+.nf
+    cl> oimstat flat*[*,1]
+    #      IMAGE      NPIX      MEAN    STDDEV       MIN       MAX
+      flat1[*,1]       800     999.5     14.09      941.     1062.
+      flat2[*,1]       800     999.4     28.87      918.     1413.
+.fi
+
+The string "flat*" uses a wildcard to select all images beginning with the
+word flat.  The string "[*,1]" is an image section selecting row 1.
+
+2. Compute the mean, midpoint, mode and standard deviation of a pixel
+distribution.
+
+.nf
+    cl> oimstat m51 fields="image,mean,midpt,mode,stddev"
+    #      IMAGE    PIXELS      MEAN     MIDPT     MODE     STDDEV
+	     M51    262144     108.3     88.75    49.4       131.3
+.fi
+
+.ih
+BUGS
+When using a very large number of pixels the accumulation of the sums
+of the pixel values to the various powers may
+encounter roundoff error.  This is significant when the true standard
+deviation is small compared to the mean.
+.ih
+SEE ALSO
+.endhelp
-- 
cgit 

