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Diffstat (limited to 'test.py')
-rwxr-xr-x | test.py | 25 |
1 files changed, 25 insertions, 0 deletions
@@ -0,0 +1,25 @@ +#!/usr/bin/env python +import argparse +import scilo + +def main(): + parser = argparse.ArgumentParser(description='Generate scientific workflow structure') + parser.add_argument('-c', '--copy-only', action='store_true', required=False, + help='Do not move original data') + parser.add_argument('-o', '--output-dir', type=str, required=True, + help='Where to store aggregated data, caches, results') + parser.add_argument('input_files', type=str, nargs='*', + help='Example: /path/to/data/*.extension') + arguments = parser.parse_args() + + if not arguments.input_files: + print('Please specify files to aggregate') + exit(1) + + dataset = scilo.scilo(arguments.output_dir) + for f in arguments.input_files: + dataset.aggregate(f, arguments.copy_only) + +if __name__ == "__main__": + main() + |