From 49cdd1fa5e4eb43a5cf92d7c5f6c88e9b5794b61 Mon Sep 17 00:00:00 2001 From: Joseph Hunkeler Date: Sat, 26 Jan 2013 16:51:43 -0500 Subject: Replacing test.py --- scilo_create.py | 24 ++++++++++++++++++++++++ 1 file changed, 24 insertions(+) create mode 100755 scilo_create.py (limited to 'scilo_create.py') diff --git a/scilo_create.py b/scilo_create.py new file mode 100755 index 0000000..0f84cea --- /dev/null +++ b/scilo_create.py @@ -0,0 +1,24 @@ +#!/usr/bin/env python +import argparse +import scilo + +def main(): + parser = argparse.ArgumentParser(description='Generate scientific workflow structure') + parser.add_argument('-c', '--copy-only', default=True, action='store_false', required=False, + help='Do not move original data') + parser.add_argument('-o', '--output-dir', type=str, required=True, + help='Where to store aggregated data, caches, results') + parser.add_argument('input_files', type=str, nargs='*', + help='Example: /path/to/data/*.extension') + arguments = parser.parse_args() + + if not arguments.input_files: + print('Please specify files to aggregate') + exit(1) + + dataset = scilo.scilo(arguments.output_dir) + dataset.aggregate(arguments.input_files, move=arguments.copy_only) + +if __name__ == "__main__": + main() + -- cgit