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Diffstat (limited to 'bin/build_hmm.sh')
| -rwxr-xr-x | bin/build_hmm.sh | 81 |
1 files changed, 0 insertions, 81 deletions
diff --git a/bin/build_hmm.sh b/bin/build_hmm.sh deleted file mode 100755 index a73b9ee..0000000 --- a/bin/build_hmm.sh +++ /dev/null @@ -1,81 +0,0 @@ -#!/bin/bash -# -# A steuermann compatible conda build script. -# -# This differs from the original build script in that it does not iterate over -# many Python or Numpy versions in an attempt to be fully comprehensive. -# Instead, since we're being "controlled", so we TELL steuermann what we want -# the script to perform at a high level (not this script), rather than making -# assumptions about what is needed/wanted at build-time. -# -# The build script uses "porcelain", and is not to be confused with "fragile". -# -# Conda uses lock files to determine whether its build (or installation) -# system is currently in use. Traditionally this means only ONE build may be -# active at a time. Porcelain installs its own miniconda into a completely -# unique temporary directory so that eliminates the problem entirely. The -# "conda build" subsystems never talk to one another while executing. - -# You may run multiple builds at the same time so long as you activate -# porcelain [correctly] per-run. -# -# Porcelain is a write-once-remove-immediately, "WORI", enviroment. Yes, -# the name does imply "worry". Be sure to either copy or move important data -# out of $PORCELAIN_PREFIX or $TMPDIR prior to calling "porcelain_deinit". -# -# DO NOT FORGET TO RUN "porcelain_deinit". -# -# If you do, you will quickly fill up the partition. Builds can be as large -# as 4GB, and potentially larger as time goes on. Don't be a doofus; always -# run "porcelain_deinit". You have been warned. -# -# Never run a build outside of the "midnight_special" environment. The IRAF -# account is a total mess. "midnight_special" performs a magical ritutal -# that reassigns $HOME and effectively carpet bombs the original environment. -# Please do not modify "midnight_special" for any reason. -# - -echo "BEFORE..." -printenv | sort -echo - -source /eng/ssb/auto/astroconda/include/midnight_special.sh -source /eng/ssb/auto/astroconda/include/sysinfo.sh -source /eng/ssb/auto/astroconda/include/logger.sh -source /eng/ssb/auto/astroconda/include/conda_porcelain.sh - -echo "AFTER..." -printenv | sort -echo - -porcelain_init - -# Setup logging -if [[ -n $sm_base ]]; then - sm_logs="$sm_base/$sm_run/$sm_node" -fi - -if [[ -n $sm_logs ]]; then - if [[ ! -d $sm_logs ]]; then - echo "Initializing steuermann log directory: $sm_logs" - mkdir -p $sm_logs - fi -fi - -# Take note that we are testing $sm_base, not $sm_logs. -if [[ -n $sm_base ]]; then - LOGDIR="$sm_logs" -else - LOGDIR="$PORCELAIN_PREFIX/logs" - mkdir -p "$LOGDIR" -fi -# Begin build processs -pushd "$PORCELAIN_PREFIX" - porcelain_get_installer - porcelain_run_installer - - logger $LOGDIR/a_test_file.log echo this output should be logged -popd - -porcelain_deinit - |