From fe8c25189726026b602e1a6a59b1dcbf72514b18 Mon Sep 17 00:00:00 2001 From: Matt Rendina Date: Tue, 21 Apr 2020 21:11:34 -0400 Subject: CALDP_20200421 (#119) --- .../CALDP_20200421_ACS_linux_py36_final.yml | 107 ++++++++++++++++++++ .../CALDP_20200421_ACS_macos_py36_final.yml | 100 +++++++++++++++++++ caldp/20200421/README.md | 62 ++++++++++++ .../dev/CALDP_darktime_ACS_linux_py36_rc1.yml | 108 +++++++++++++++++++++ .../dev/CALDP_darktime_ACS_macos_py36_rc1.yml | 101 +++++++++++++++++++ caldp/20200421/latest-linux.yml | 1 + caldp/20200421/latest-macos.yml | 1 + caldp/20200421/latest-osx.yml | 1 + caldp/20200421/release_notes.md | 4 + caldp/20200421/software_updates.md | 17 ++++ caldp/darktime/README.md | 63 ------------ .../dev/CALDP_darktime_ACS_linux_py36_rc1.yml | 108 --------------------- .../dev/CALDP_darktime_ACS_macos_py36_rc1.yml | 101 ------------------- caldp/darktime/latest-linux.yml | 1 - caldp/darktime/latest-macos.yml | 1 - caldp/darktime/latest-osx.yml | 1 - caldp/darktime/release_notes.md | 3 - caldp/darktime/software_updates.md | 17 ---- 18 files changed, 502 insertions(+), 295 deletions(-) create mode 100644 caldp/20200421/CALDP_20200421_ACS_linux_py36_final.yml create mode 100644 caldp/20200421/CALDP_20200421_ACS_macos_py36_final.yml create mode 100644 caldp/20200421/README.md create mode 100644 caldp/20200421/dev/CALDP_darktime_ACS_linux_py36_rc1.yml create mode 100644 caldp/20200421/dev/CALDP_darktime_ACS_macos_py36_rc1.yml create mode 120000 caldp/20200421/latest-linux.yml create mode 120000 caldp/20200421/latest-macos.yml create mode 120000 caldp/20200421/latest-osx.yml create mode 100644 caldp/20200421/release_notes.md create mode 100644 caldp/20200421/software_updates.md delete mode 100644 caldp/darktime/README.md delete mode 100644 caldp/darktime/dev/CALDP_darktime_ACS_linux_py36_rc1.yml delete mode 100644 caldp/darktime/dev/CALDP_darktime_ACS_macos_py36_rc1.yml delete mode 120000 caldp/darktime/latest-linux.yml delete mode 120000 caldp/darktime/latest-macos.yml delete mode 120000 caldp/darktime/latest-osx.yml delete mode 100644 caldp/darktime/release_notes.md delete mode 100644 caldp/darktime/software_updates.md (limited to 'caldp') diff --git a/caldp/20200421/CALDP_20200421_ACS_linux_py36_final.yml b/caldp/20200421/CALDP_20200421_ACS_linux_py36_final.yml new file mode 100644 index 0000000..4ab9d03 --- /dev/null +++ b/caldp/20200421/CALDP_20200421_ACS_linux_py36_final.yml @@ -0,0 +1,107 @@ +channels: +- https://ssb.stsci.edu/astroconda +- defaults +dependencies: +- _libgcc_mutex=0.1=main +- bzip2=1.0.8=h7b6447c_0 +- ca-certificates=2020.1.1=0 +- certifi=2020.4.5.1=py36_0 +- cfitsio=3.470=1 +- fitsverify=4.18=13 +- hstcal=2.3.2_0 +- ld_impl_linux-64=2.33.1=h53a641e_7 +- libedit=3.1.20181209=hc058e9b_0 +- libffi=3.2.1=hd88cf55_4 +- libgcc=7.2.0=h69d50b8_2 +- libgcc-ng=9.1.0=hdf63c60_0 +- libgfortran-ng=7.3.0=hdf63c60_0 +- libstdcxx-ng=9.1.0=hdf63c60_0 +- ncurses=6.2=he6710b0_0 +- openssl=1.1.1f=h7b6447c_0 +- pip=20.0.2=py36_1 +- python=3.6.10=hcf32534_1 +- readline=8.0=h7b6447c_0 +- setuptools=46.1.3=py36_0 +- sqlite=3.31.1=h7b6447c_0 +- tk=8.6.8=hbc83047_0 +- wheel=0.34.2=py36_0 +- xz=5.2.4=h14c3975_4 +- zlib=1.2.11=h7b6447c_3 +- pip: + - acstools==3.1.0 + - alabaster==0.7.12 + - astropy==4.0.1.post1 + - astroquery==0.4 + - babel==2.8.0 + - beautifulsoup4==4.9.0 + - calcos==3.3.9 + - cffi==1.14.0 + - chardet==3.0.4 + - costools==1.2.3 + - crds==7.4.1.3 + - cryptography==2.9 + - cycler==0.10.0 + - decorator==4.4.2 + - docutils==0.16 + - drizzlepac==3.1.6 + - filelock==3.0.12 + - fitsblender==0.3.6 + - html5lib==1.0.1 + - idna==2.9 + - imageio==2.8.0 + - imagesize==1.2.0 + - importlib-metadata==1.6.0 + - jeepney==0.4.3 + - jinja2==2.11.1 + - keyring==21.2.0 + - kiwisolver==1.2.0 + - lxml==4.5.0 + - markupsafe==1.1.1 + - matplotlib==3.2.1 + - networkx==2.4 + - nictools==1.1.5 + - nose==1.3.7 + - numpy==1.18.2 + - numpydoc==0.9.2 + - packaging==20.3 + - parsley==1.3 + - photutils==0.7.2 + - pillow==7.1.1 + - pycparser==2.20 + - pygments==2.6.1 + - pyparsing==2.4.7 + - pysynphot==0.9.14 + - python-dateutil==2.8.1 + - pytz==2019.3 + - pywavelets==1.1.1 + - requests==2.23.0 + - scikit-image==0.16.2 + - scipy==1.4.1 + - secretstorage==3.1.2 + - six==1.14.0 + - snowballstemmer==2.0.0 + - soupsieve==2.0 + - spherical-geometry==1.2.18 + - sphinx==3.0.0 + - sphinx-rtd-theme==0.4.3 + - sphinxcontrib-applehelp==1.0.2 + - sphinxcontrib-devhelp==1.0.2 + - sphinxcontrib-htmlhelp==1.0.3 + - sphinxcontrib-jsmath==1.0.1 + - sphinxcontrib-qthelp==1.0.3 + - sphinxcontrib-serializinghtml==1.1.4 + - stistools==1.3.0 + - stregion==1.1.6 + - stsci-image==2.3.3 + - stsci-imagestats==1.6.2 + - stsci-rtd-theme==0.0.2 + - stsci-skypac==1.0.4 + - stsci-stimage==0.2.4 + - stsci-tools==3.6.0 + - stwcs==1.5.3 + - tweakwcs==0.6.1 + - urllib3==1.25.8 + - webencodings==0.5.1 + - wfc3tools==1.3.5 + - wfpc2tools==1.0.5 + - zipp==3.1.0 diff --git a/caldp/20200421/CALDP_20200421_ACS_macos_py36_final.yml b/caldp/20200421/CALDP_20200421_ACS_macos_py36_final.yml new file mode 100644 index 0000000..d69aba2 --- /dev/null +++ b/caldp/20200421/CALDP_20200421_ACS_macos_py36_final.yml @@ -0,0 +1,100 @@ +channels: +- https://ssb.stsci.edu/astroconda +- defaults +dependencies: +- bzip2=1.0.8=h1de35cc_0 +- ca-certificates=2020.1.1=0 +- certifi=2020.4.5.1=py36_0 +- cfitsio=3.470=1 +- fitsverify=4.18=13 +- hstcal=2.3.2_0 +- libcxx=4.0.1=hcfea43d_1 +- libcxxabi=4.0.1=hcfea43d_1 +- libedit=3.1.20181209=hb402a30_0 +- libffi=3.2.1=h475c297_4 +- libgcc=4.8.5=hdbeacc1_10 +- libgfortran=3.0.1=h93005f0_2 +- ncurses=6.2=h0a44026_0 +- openssl=1.1.1f=h1de35cc_0 +- pip=20.0.2=py36_1 +- python=3.6.10=hc70fcce_1 +- readline=8.0=h1de35cc_0 +- setuptools=46.1.3=py36_0 +- sqlite=3.31.1=ha441bb4_0 +- tk=8.6.8=ha441bb4_0 +- wheel=0.34.2=py36_0 +- xz=5.2.4=h1de35cc_4 +- zlib=1.2.11=h1de35cc_3 +- pip: + - acstools==3.1.0 + - alabaster==0.7.12 + - astropy==4.0.1.post1 + - astroquery==0.4 + - babel==2.8.0 + - beautifulsoup4==4.9.0 + - calcos==3.3.9 + - chardet==3.0.4 + - costools==1.2.3 + - crds==7.4.1.3 + - cycler==0.10.0 + - decorator==4.4.2 + - docutils==0.16 + - drizzlepac==3.1.6 + - filelock==3.0.12 + - fitsblender==0.3.6 + - html5lib==1.0.1 + - idna==2.9 + - imageio==2.8.0 + - imagesize==1.2.0 + - importlib-metadata==1.6.0 + - jinja2==2.11.1 + - keyring==21.2.0 + - kiwisolver==1.2.0 + - lxml==4.5.0 + - markupsafe==1.1.1 + - matplotlib==3.2.1 + - networkx==2.4 + - nictools==1.1.5 + - nose==1.3.7 + - numpy==1.18.2 + - numpydoc==0.9.2 + - packaging==20.3 + - parsley==1.3 + - photutils==0.7.2 + - pillow==7.1.1 + - pygments==2.6.1 + - pyparsing==2.4.7 + - pysynphot==0.9.14 + - python-dateutil==2.8.1 + - pytz==2019.3 + - pywavelets==1.1.1 + - requests==2.23.0 + - scikit-image==0.16.2 + - scipy==1.4.1 + - six==1.14.0 + - snowballstemmer==2.0.0 + - soupsieve==2.0 + - spherical-geometry==1.2.18 + - sphinx==3.0.0 + - sphinx-rtd-theme==0.4.3 + - sphinxcontrib-applehelp==1.0.2 + - sphinxcontrib-devhelp==1.0.2 + - sphinxcontrib-htmlhelp==1.0.3 + - sphinxcontrib-jsmath==1.0.1 + - sphinxcontrib-qthelp==1.0.3 + - sphinxcontrib-serializinghtml==1.1.4 + - stistools==1.3.0 + - stregion==1.1.6 + - stsci-image==2.3.3 + - stsci-imagestats==1.6.2 + - stsci-rtd-theme==0.0.2 + - stsci-skypac==1.0.4 + - stsci-stimage==0.2.4 + - stsci-tools==3.6.0 + - stwcs==1.5.3 + - tweakwcs==0.6.1 + - urllib3==1.25.8 + - webencodings==0.5.1 + - wfc3tools==1.3.5 + - wfpc2tools==1.0.5 + - zipp==3.1.0 diff --git a/caldp/20200421/README.md b/caldp/20200421/README.md new file mode 100644 index 0000000..e38a20b --- /dev/null +++ b/caldp/20200421/README.md @@ -0,0 +1,62 @@ +During testing, the codename of this environment delivery was 'darktime'. + +# Installing + +Currently, conda is required to manage installation of the enviornment. A fresh +installation of Anaconda3 or Miniconda3 is not required for each HCALDP release, +however. An existing conda installation may be used. The method described here +allows for multiple, entirely segregated, pipeline installations. + +A `bash`-compatible shell is required for all steps below. + +Python dependencies are now taken directly from PyPI or development repositories as +needed, so conda's ability to install hybrid conda/pip environments from a YAML +specification is used. This requires first downloading the specification file +and then creating the environment with it. + +## For existing conda installations: + +### Install the pipeline environment + +``` +$ curl -O https://ssb.stsci.edu/releases/caldp/20200421/latest-linux.yml +$ conda env create -n caldp_20200421 --file latest-linux.yml +``` + + +### Activate the pipeline environment + +``` +$ source activate caldp_20200421 +``` + +Each new delivery iteration of the calibration environment will need to be +installed using the above commands. + +------ + +## If conda is not yet installed + +If the conda tool is not available on the target system, it will need to be +installed before the calibration environment can be installed. + +### Installing conda + +For detailed instructions of this step, please visit: http://docs.continuum.io/anaconda/install#linux-install + +**Miniconda:** + +``` +$ wget https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.2-Linux-x86_64.sh +$ bash Miniconda3-py37_4.8.2-Linux-x86_64.sh +$ export PATH=$HOME/miniconda3/bin:$PATH +``` + +**Anaconda (if preferred):** + +``` +$ wget https://repo.continuum.io/archive/Anaconda3-2019.10-Linux-x86_64.sh +$ bash Anaconda3-2019.10-Linux-x86_64.sh +$ export PATH=$HOME/anaconda3/bin:$PATH +``` + diff --git a/caldp/20200421/dev/CALDP_darktime_ACS_linux_py36_rc1.yml b/caldp/20200421/dev/CALDP_darktime_ACS_linux_py36_rc1.yml new file mode 100644 index 0000000..c6b2536 --- /dev/null +++ b/caldp/20200421/dev/CALDP_darktime_ACS_linux_py36_rc1.yml @@ -0,0 +1,108 @@ +channels: +- https://ssb.stsci.edu/astroconda-staging +- https://ssb.stsci.edu/astroconda +- defaults +dependencies: +- _libgcc_mutex=0.1=main +- bzip2=1.0.8=h7b6447c_0 +- ca-certificates=2020.1.1=0 +- certifi=2020.4.5.1=py36_0 +- cfitsio=3.470=1 +- fitsverify=4.18=13 +- hstcal=2.3.2rc1.dev0+ga822901f=5 +- ld_impl_linux-64=2.33.1=h53a641e_7 +- libedit=3.1.20181209=hc058e9b_0 +- libffi=3.2.1=hd88cf55_4 +- libgcc=7.2.0=h69d50b8_2 +- libgcc-ng=9.1.0=hdf63c60_0 +- libgfortran-ng=7.3.0=hdf63c60_0 +- libstdcxx-ng=9.1.0=hdf63c60_0 +- ncurses=6.2=he6710b0_0 +- openssl=1.1.1f=h7b6447c_0 +- pip=20.0.2=py36_1 +- python=3.6.10=hcf32534_1 +- readline=8.0=h7b6447c_0 +- setuptools=46.1.3=py36_0 +- sqlite=3.31.1=h7b6447c_0 +- tk=8.6.8=hbc83047_0 +- wheel=0.34.2=py36_0 +- xz=5.2.4=h14c3975_4 +- zlib=1.2.11=h7b6447c_3 +- pip: + - acstools==3.1.0 + - alabaster==0.7.12 + - astropy==4.0.1.post1 + - astroquery==0.4 + - babel==2.8.0 + - beautifulsoup4==4.9.0 + - calcos==3.3.9 + - cffi==1.14.0 + - chardet==3.0.4 + - costools==1.2.3 + - crds==7.4.1.3 + - cryptography==2.9 + - cycler==0.10.0 + - decorator==4.4.2 + - docutils==0.16 + - drizzlepac==3.1.6 + - filelock==3.0.12 + - fitsblender==0.3.6 + - html5lib==1.0.1 + - idna==2.9 + - imageio==2.8.0 + - imagesize==1.2.0 + - importlib-metadata==1.6.0 + - jeepney==0.4.3 + - jinja2==2.11.1 + - keyring==21.2.0 + - kiwisolver==1.2.0 + - lxml==4.5.0 + - markupsafe==1.1.1 + - matplotlib==3.2.1 + - networkx==2.4 + - nictools==1.1.5 + - nose==1.3.7 + - numpy==1.18.2 + - numpydoc==0.9.2 + - packaging==20.3 + - parsley==1.3 + - photutils==0.7.2 + - pillow==7.1.1 + - pycparser==2.20 + - pygments==2.6.1 + - pyparsing==2.4.7 + - pysynphot==0.9.14 + - python-dateutil==2.8.1 + - pytz==2019.3 + - pywavelets==1.1.1 + - requests==2.23.0 + - scikit-image==0.16.2 + - scipy==1.4.1 + - secretstorage==3.1.2 + - six==1.14.0 + - snowballstemmer==2.0.0 + - soupsieve==2.0 + - spherical-geometry==1.2.18 + - sphinx==3.0.0 + - sphinx-rtd-theme==0.4.3 + - sphinxcontrib-applehelp==1.0.2 + - sphinxcontrib-devhelp==1.0.2 + - sphinxcontrib-htmlhelp==1.0.3 + - sphinxcontrib-jsmath==1.0.1 + - sphinxcontrib-qthelp==1.0.3 + - sphinxcontrib-serializinghtml==1.1.4 + - stistools==1.3.0 + - stregion==1.1.6 + - stsci-image==2.3.3 + - stsci-imagestats==1.6.2 + - stsci-rtd-theme==0.0.2 + - stsci-skypac==1.0.4 + - stsci-stimage==0.2.4 + - stsci-tools==3.6.0 + - stwcs==1.5.3 + - tweakwcs==0.6.1 + - urllib3==1.25.8 + - webencodings==0.5.1 + - wfc3tools==1.3.5 + - wfpc2tools==1.0.5 + - zipp==3.1.0 diff --git a/caldp/20200421/dev/CALDP_darktime_ACS_macos_py36_rc1.yml b/caldp/20200421/dev/CALDP_darktime_ACS_macos_py36_rc1.yml new file mode 100644 index 0000000..d5ab132 --- /dev/null +++ b/caldp/20200421/dev/CALDP_darktime_ACS_macos_py36_rc1.yml @@ -0,0 +1,101 @@ +channels: +- https://ssb.stsci.edu/astroconda-staging +- https://ssb.stsci.edu/astroconda +- defaults +dependencies: +- bzip2=1.0.8=h1de35cc_0 +- ca-certificates=2020.1.1=0 +- certifi=2020.4.5.1=py36_0 +- cfitsio=3.470=1 +- fitsverify=4.18=13 +- hstcal=2.3.2rc1.dev0+ga822901f=5 +- libcxx=4.0.1=hcfea43d_1 +- libcxxabi=4.0.1=hcfea43d_1 +- libedit=3.1.20181209=hb402a30_0 +- libffi=3.2.1=h475c297_4 +- libgcc=4.8.5=hdbeacc1_10 +- libgfortran=3.0.1=h93005f0_2 +- ncurses=6.2=h0a44026_0 +- openssl=1.1.1f=h1de35cc_0 +- pip=20.0.2=py36_1 +- python=3.6.10=hc70fcce_1 +- readline=8.0=h1de35cc_0 +- setuptools=46.1.3=py36_0 +- sqlite=3.31.1=ha441bb4_0 +- tk=8.6.8=ha441bb4_0 +- wheel=0.34.2=py36_0 +- xz=5.2.4=h1de35cc_4 +- zlib=1.2.11=h1de35cc_3 +- pip: + - acstools==3.1.0 + - alabaster==0.7.12 + - astropy==4.0.1.post1 + - astroquery==0.4 + - babel==2.8.0 + - beautifulsoup4==4.9.0 + - calcos==3.3.9 + - chardet==3.0.4 + - costools==1.2.3 + - crds==7.4.1.3 + - cycler==0.10.0 + - decorator==4.4.2 + - docutils==0.16 + - drizzlepac==3.1.6 + - filelock==3.0.12 + - fitsblender==0.3.6 + - html5lib==1.0.1 + - idna==2.9 + - imageio==2.8.0 + - imagesize==1.2.0 + - importlib-metadata==1.6.0 + - jinja2==2.11.1 + - keyring==21.2.0 + - kiwisolver==1.2.0 + - lxml==4.5.0 + - markupsafe==1.1.1 + - matplotlib==3.2.1 + - networkx==2.4 + - nictools==1.1.5 + - nose==1.3.7 + - numpy==1.18.2 + - numpydoc==0.9.2 + - packaging==20.3 + - parsley==1.3 + - photutils==0.7.2 + - pillow==7.1.1 + - pygments==2.6.1 + - pyparsing==2.4.7 + - pysynphot==0.9.14 + - python-dateutil==2.8.1 + - pytz==2019.3 + - pywavelets==1.1.1 + - requests==2.23.0 + - scikit-image==0.16.2 + - scipy==1.4.1 + - six==1.14.0 + - snowballstemmer==2.0.0 + - soupsieve==2.0 + - spherical-geometry==1.2.18 + - sphinx==3.0.0 + - sphinx-rtd-theme==0.4.3 + - sphinxcontrib-applehelp==1.0.2 + - sphinxcontrib-devhelp==1.0.2 + - sphinxcontrib-htmlhelp==1.0.3 + - sphinxcontrib-jsmath==1.0.1 + - sphinxcontrib-qthelp==1.0.3 + - sphinxcontrib-serializinghtml==1.1.4 + - stistools==1.3.0 + - stregion==1.1.6 + - stsci-image==2.3.3 + - stsci-imagestats==1.6.2 + - stsci-rtd-theme==0.0.2 + - stsci-skypac==1.0.4 + - stsci-stimage==0.2.4 + - stsci-tools==3.6.0 + - stwcs==1.5.3 + - tweakwcs==0.6.1 + - urllib3==1.25.8 + - webencodings==0.5.1 + - wfc3tools==1.3.5 + - wfpc2tools==1.0.5 + - zipp==3.1.0 diff --git a/caldp/20200421/latest-linux.yml b/caldp/20200421/latest-linux.yml new file mode 120000 index 0000000..586b545 --- /dev/null +++ b/caldp/20200421/latest-linux.yml @@ -0,0 +1 @@ +CALDP_20200421_ACS_linux_py36_final.yml \ No newline at end of file diff --git a/caldp/20200421/latest-macos.yml b/caldp/20200421/latest-macos.yml new file mode 120000 index 0000000..6ca3158 --- /dev/null +++ b/caldp/20200421/latest-macos.yml @@ -0,0 +1 @@ +CALDP_20200421_ACS_macos_py36_final.yml \ No newline at end of file diff --git a/caldp/20200421/latest-osx.yml b/caldp/20200421/latest-osx.yml new file mode 120000 index 0000000..6ca3158 --- /dev/null +++ b/caldp/20200421/latest-osx.yml @@ -0,0 +1 @@ +CALDP_20200421_ACS_macos_py36_final.yml \ No newline at end of file diff --git a/caldp/20200421/release_notes.md b/caldp/20200421/release_notes.md new file mode 100644 index 0000000..01fcf49 --- /dev/null +++ b/caldp/20200421/release_notes.md @@ -0,0 +1,4 @@ +# Release Notes + +* 2020/04/21 - Final +* 2020/04/06 - Initial iteration diff --git a/caldp/20200421/software_updates.md b/caldp/20200421/software_updates.md new file mode 100644 index 0000000..52fab36 --- /dev/null +++ b/caldp/20200421/software_updates.md @@ -0,0 +1,17 @@ +# HSTCAL Version 2.3.2 + +The following updates, specified in separate sections for each instrument, have been included with this release. This release is presented as [HSTDP-2020.6.2 milestones]. + +## HSTCAL package updates + +## ACS + +- CALACS updated to Version 10.2.2 + +- In the DARKCORR step of CALACS, the value of the DARKTIME keyword is used to account for time that dark current accumulates. It has been determined that depending upon the type of WFC observation (i.e., full frame or subarray, post-flash or no post-flash) there is an additional correction needed. The additional correction values need to be read from updated CCDTAB reference files, and correspondingly, the DARKCORR algorithm has been updated to accommodate new logic for applying the correction. +Issue #326/PR #467. + + +- [x] Affects old data +- [x] Users should re-retrieve affected datasets from the archive +- [x] Updated reference files delivered by science team diff --git a/caldp/darktime/README.md b/caldp/darktime/README.md deleted file mode 100644 index a18423e..0000000 --- a/caldp/darktime/README.md +++ /dev/null @@ -1,63 +0,0 @@ -NOTE: This release continues in using some recently introduced minor changes in installation -procedures. Please see below for details. - -# Installing - -Currently, conda is required to manage installation of the enviornment. A fresh -installation of Anaconda3 or Miniconda3 is not required for each HCALDP release, -however. An existing conda installation may be used. The method described here -allows for multiple, entirely segregated, pipeline installations. - -A `bash`-compatible shell is required for all steps below. - -Python dependencies are now taken directly from PyPI or development repositories as -needed, so conda's ability to install hybrid conda/pip environments from a YAML -specification is used. This requires first downloading the specification file -and then creating the environment with it. - -## For existing conda installations: - -### Install the pipeline environment - -``` -$ curl -O https://ssb.stsci.edu/releases/caldp/darktime/latest-linux.yml -$ conda env create -n caldp_darktime --file latest-linux.yml -``` - - -### Activate the pipeline environment - -``` -$ source activate caldp_darktime -``` - -Each new delivery iteration of the calibration environment will need to be -installed using the above commands. - ------- - -## If conda is not yet installed - -If the conda tool is not available on the target system, it will need to be -installed before the calibration environment can be installed. - -### Installing conda - -For detailed instructions of this step, please visit: http://docs.continuum.io/anaconda/install#linux-install - -**Miniconda:** - -``` -$ wget https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.2-Linux-x86_64.sh -$ bash Miniconda3-py37_4.8.2-Linux-x86_64.sh -$ export PATH=$HOME/miniconda3/bin:$PATH -``` - -**Anaconda (if preferred):** - -``` -$ wget https://repo.continuum.io/archive/Anaconda3-2019.10-Linux-x86_64.sh -$ bash Anaconda3-2019.10-Linux-x86_64.sh -$ export PATH=$HOME/anaconda3/bin:$PATH -``` - diff --git a/caldp/darktime/dev/CALDP_darktime_ACS_linux_py36_rc1.yml b/caldp/darktime/dev/CALDP_darktime_ACS_linux_py36_rc1.yml deleted file mode 100644 index c6b2536..0000000 --- a/caldp/darktime/dev/CALDP_darktime_ACS_linux_py36_rc1.yml +++ /dev/null @@ -1,108 +0,0 @@ -channels: -- https://ssb.stsci.edu/astroconda-staging -- https://ssb.stsci.edu/astroconda -- defaults -dependencies: -- _libgcc_mutex=0.1=main -- bzip2=1.0.8=h7b6447c_0 -- ca-certificates=2020.1.1=0 -- certifi=2020.4.5.1=py36_0 -- cfitsio=3.470=1 -- fitsverify=4.18=13 -- hstcal=2.3.2rc1.dev0+ga822901f=5 -- ld_impl_linux-64=2.33.1=h53a641e_7 -- libedit=3.1.20181209=hc058e9b_0 -- libffi=3.2.1=hd88cf55_4 -- libgcc=7.2.0=h69d50b8_2 -- libgcc-ng=9.1.0=hdf63c60_0 -- libgfortran-ng=7.3.0=hdf63c60_0 -- libstdcxx-ng=9.1.0=hdf63c60_0 -- ncurses=6.2=he6710b0_0 -- openssl=1.1.1f=h7b6447c_0 -- pip=20.0.2=py36_1 -- python=3.6.10=hcf32534_1 -- readline=8.0=h7b6447c_0 -- setuptools=46.1.3=py36_0 -- sqlite=3.31.1=h7b6447c_0 -- tk=8.6.8=hbc83047_0 -- wheel=0.34.2=py36_0 -- xz=5.2.4=h14c3975_4 -- zlib=1.2.11=h7b6447c_3 -- pip: - - acstools==3.1.0 - - alabaster==0.7.12 - - astropy==4.0.1.post1 - - astroquery==0.4 - - babel==2.8.0 - - beautifulsoup4==4.9.0 - - calcos==3.3.9 - - cffi==1.14.0 - - chardet==3.0.4 - - costools==1.2.3 - - crds==7.4.1.3 - - cryptography==2.9 - - cycler==0.10.0 - - decorator==4.4.2 - - docutils==0.16 - - drizzlepac==3.1.6 - - filelock==3.0.12 - - fitsblender==0.3.6 - - html5lib==1.0.1 - - idna==2.9 - - imageio==2.8.0 - - imagesize==1.2.0 - - importlib-metadata==1.6.0 - - jeepney==0.4.3 - - jinja2==2.11.1 - - keyring==21.2.0 - - kiwisolver==1.2.0 - - lxml==4.5.0 - - markupsafe==1.1.1 - - matplotlib==3.2.1 - - networkx==2.4 - - nictools==1.1.5 - - nose==1.3.7 - - numpy==1.18.2 - - numpydoc==0.9.2 - - packaging==20.3 - - parsley==1.3 - - photutils==0.7.2 - - pillow==7.1.1 - - pycparser==2.20 - - pygments==2.6.1 - - pyparsing==2.4.7 - - pysynphot==0.9.14 - - python-dateutil==2.8.1 - - pytz==2019.3 - - pywavelets==1.1.1 - - requests==2.23.0 - - scikit-image==0.16.2 - - scipy==1.4.1 - - secretstorage==3.1.2 - - six==1.14.0 - - snowballstemmer==2.0.0 - - soupsieve==2.0 - - spherical-geometry==1.2.18 - - sphinx==3.0.0 - - sphinx-rtd-theme==0.4.3 - - sphinxcontrib-applehelp==1.0.2 - - sphinxcontrib-devhelp==1.0.2 - - sphinxcontrib-htmlhelp==1.0.3 - - sphinxcontrib-jsmath==1.0.1 - - sphinxcontrib-qthelp==1.0.3 - - sphinxcontrib-serializinghtml==1.1.4 - - stistools==1.3.0 - - stregion==1.1.6 - - stsci-image==2.3.3 - - stsci-imagestats==1.6.2 - - stsci-rtd-theme==0.0.2 - - stsci-skypac==1.0.4 - - stsci-stimage==0.2.4 - - stsci-tools==3.6.0 - - stwcs==1.5.3 - - tweakwcs==0.6.1 - - urllib3==1.25.8 - - webencodings==0.5.1 - - wfc3tools==1.3.5 - - wfpc2tools==1.0.5 - - zipp==3.1.0 diff --git a/caldp/darktime/dev/CALDP_darktime_ACS_macos_py36_rc1.yml b/caldp/darktime/dev/CALDP_darktime_ACS_macos_py36_rc1.yml deleted file mode 100644 index d5ab132..0000000 --- a/caldp/darktime/dev/CALDP_darktime_ACS_macos_py36_rc1.yml +++ /dev/null @@ -1,101 +0,0 @@ -channels: -- https://ssb.stsci.edu/astroconda-staging -- https://ssb.stsci.edu/astroconda -- defaults -dependencies: -- bzip2=1.0.8=h1de35cc_0 -- ca-certificates=2020.1.1=0 -- certifi=2020.4.5.1=py36_0 -- cfitsio=3.470=1 -- fitsverify=4.18=13 -- hstcal=2.3.2rc1.dev0+ga822901f=5 -- libcxx=4.0.1=hcfea43d_1 -- libcxxabi=4.0.1=hcfea43d_1 -- libedit=3.1.20181209=hb402a30_0 -- libffi=3.2.1=h475c297_4 -- libgcc=4.8.5=hdbeacc1_10 -- libgfortran=3.0.1=h93005f0_2 -- ncurses=6.2=h0a44026_0 -- openssl=1.1.1f=h1de35cc_0 -- pip=20.0.2=py36_1 -- python=3.6.10=hc70fcce_1 -- readline=8.0=h1de35cc_0 -- setuptools=46.1.3=py36_0 -- sqlite=3.31.1=ha441bb4_0 -- tk=8.6.8=ha441bb4_0 -- wheel=0.34.2=py36_0 -- xz=5.2.4=h1de35cc_4 -- zlib=1.2.11=h1de35cc_3 -- pip: - - acstools==3.1.0 - - alabaster==0.7.12 - - astropy==4.0.1.post1 - - astroquery==0.4 - - babel==2.8.0 - - beautifulsoup4==4.9.0 - - calcos==3.3.9 - - chardet==3.0.4 - - costools==1.2.3 - - crds==7.4.1.3 - - cycler==0.10.0 - - decorator==4.4.2 - - docutils==0.16 - - drizzlepac==3.1.6 - - filelock==3.0.12 - - fitsblender==0.3.6 - - html5lib==1.0.1 - - idna==2.9 - - imageio==2.8.0 - - imagesize==1.2.0 - - importlib-metadata==1.6.0 - - jinja2==2.11.1 - - keyring==21.2.0 - - kiwisolver==1.2.0 - - lxml==4.5.0 - - markupsafe==1.1.1 - - matplotlib==3.2.1 - - networkx==2.4 - - nictools==1.1.5 - - nose==1.3.7 - - numpy==1.18.2 - - numpydoc==0.9.2 - - packaging==20.3 - - parsley==1.3 - - photutils==0.7.2 - - pillow==7.1.1 - - pygments==2.6.1 - - pyparsing==2.4.7 - - pysynphot==0.9.14 - - python-dateutil==2.8.1 - - pytz==2019.3 - - pywavelets==1.1.1 - - requests==2.23.0 - - scikit-image==0.16.2 - - scipy==1.4.1 - - six==1.14.0 - - snowballstemmer==2.0.0 - - soupsieve==2.0 - - spherical-geometry==1.2.18 - - sphinx==3.0.0 - - sphinx-rtd-theme==0.4.3 - - sphinxcontrib-applehelp==1.0.2 - - sphinxcontrib-devhelp==1.0.2 - - sphinxcontrib-htmlhelp==1.0.3 - - sphinxcontrib-jsmath==1.0.1 - - sphinxcontrib-qthelp==1.0.3 - - sphinxcontrib-serializinghtml==1.1.4 - - stistools==1.3.0 - - stregion==1.1.6 - - stsci-image==2.3.3 - - stsci-imagestats==1.6.2 - - stsci-rtd-theme==0.0.2 - - stsci-skypac==1.0.4 - - stsci-stimage==0.2.4 - - stsci-tools==3.6.0 - - stwcs==1.5.3 - - tweakwcs==0.6.1 - - urllib3==1.25.8 - - webencodings==0.5.1 - - wfc3tools==1.3.5 - - wfpc2tools==1.0.5 - - zipp==3.1.0 diff --git a/caldp/darktime/latest-linux.yml b/caldp/darktime/latest-linux.yml deleted file mode 120000 index 8cbacc2..0000000 --- a/caldp/darktime/latest-linux.yml +++ /dev/null @@ -1 +0,0 @@ -dev/CALDP_darktime_ACS_linux_py36_rc1.yml \ No newline at end of file diff --git a/caldp/darktime/latest-macos.yml b/caldp/darktime/latest-macos.yml deleted file mode 120000 index d1d84c3..0000000 --- a/caldp/darktime/latest-macos.yml +++ /dev/null @@ -1 +0,0 @@ -dev/CALDP_darktime_ACS_macos_py36_rc1.yml \ No newline at end of file diff --git a/caldp/darktime/latest-osx.yml b/caldp/darktime/latest-osx.yml deleted file mode 120000 index d1d84c3..0000000 --- a/caldp/darktime/latest-osx.yml +++ /dev/null @@ -1 +0,0 @@ -dev/CALDP_darktime_ACS_macos_py36_rc1.yml \ No newline at end of file diff --git a/caldp/darktime/release_notes.md b/caldp/darktime/release_notes.md deleted file mode 100644 index 13767d0..0000000 --- a/caldp/darktime/release_notes.md +++ /dev/null @@ -1,3 +0,0 @@ -# Release Notes - -* 2020/04/06 - Initial iteration diff --git a/caldp/darktime/software_updates.md b/caldp/darktime/software_updates.md deleted file mode 100644 index 52fab36..0000000 --- a/caldp/darktime/software_updates.md +++ /dev/null @@ -1,17 +0,0 @@ -# HSTCAL Version 2.3.2 - -The following updates, specified in separate sections for each instrument, have been included with this release. This release is presented as [HSTDP-2020.6.2 milestones]. - -## HSTCAL package updates - -## ACS - -- CALACS updated to Version 10.2.2 - -- In the DARKCORR step of CALACS, the value of the DARKTIME keyword is used to account for time that dark current accumulates. It has been determined that depending upon the type of WFC observation (i.e., full frame or subarray, post-flash or no post-flash) there is an additional correction needed. The additional correction values need to be read from updated CCDTAB reference files, and correspondingly, the DARKCORR algorithm has been updated to accommodate new logic for applying the correction. -Issue #326/PR #467. - - -- [x] Affects old data -- [x] Users should re-retrieve affected datasets from the archive -- [x] Updated reference files delivered by science team -- cgit