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authorJoseph Hunkeler <jhunkeler@gmail.com>2024-10-09 10:02:47 -0400
committerJoseph Hunkeler <jhunkeler@gmail.com>2024-10-09 10:02:47 -0400
commit5801afb48cff83547bccbf214da2b205c9fadcac (patch)
treea8c9705532334c962239d7fa9ba0cebcb9cbdc84
parent92b92bfc4913d03acfe4a0b2ca33c5a891790f75 (diff)
downloadstasis-5801afb48cff83547bccbf214da2b205c9fadcac.tar.gz
Add static function micromamba_configure() to indexer
* Performing all of the setup tasks within indexer_conda() is very restrictive * The conda environment bin directory is added to the program PATH
-rw-r--r--src/stasis_indexer.c48
1 files changed, 39 insertions, 9 deletions
diff --git a/src/stasis_indexer.c b/src/stasis_indexer.c
index 1630255..b703ec5 100644
--- a/src/stasis_indexer.c
+++ b/src/stasis_indexer.c
@@ -396,18 +396,42 @@ int indexer_make_website(struct Delivery *ctx) {
return 0;
}
-int indexer_conda(struct Delivery *ctx) {
+static int micromamba_configure(const struct Delivery *ctx, struct MicromambaInfo *m) {
int status = 0;
- char micromamba_prefix[PATH_MAX] = {0};
- sprintf(micromamba_prefix, "%s/bin", ctx->storage.tools_dir);
- struct MicromambaInfo m = {.conda_prefix = globals.conda_install_prefix, .micromamba_prefix = micromamba_prefix};
+ char *micromamba_prefix = NULL;
+ if (asprintf(&micromamba_prefix, "%s/bin", ctx->storage.tools_dir) < 0) {
+ return -1;
+ }
+ m->conda_prefix = globals.conda_install_prefix;
+ m->micromamba_prefix = micromamba_prefix;
+
+ size_t pathvar_len = strlen(getenv("PATH")) + strlen(m->micromamba_prefix + strlen(m->conda_prefix)) + 3 + 4 + 1;
+ // ^^^^^^^^^^^^^^^^^^
+ // 3 = separators
+ // 4 = chars (/bin)
+ // 1 = nul terminator
+ char *pathvar = calloc(pathvar_len, sizeof(*pathvar));
+ if (!pathvar) {
+ SYSERROR("%s", "Unable to allocate bytes for temporary path string");
+ exit(1);
+ }
+ snprintf(pathvar, pathvar_len, "%s/bin:%s:%s", m->conda_prefix, m->micromamba_prefix, getenv("PATH"));
+ setenv("PATH", pathvar, 1);
+ guard_free(pathvar);
- status += micromamba(&m, "config prepend --env channels conda-forge");
+ status += micromamba(m, "config prepend --env channels conda-forge");
if (!globals.verbose) {
- status += micromamba(&m, "config set --env quiet true");
+ status += micromamba(m, "config set --env quiet true");
}
- status += micromamba(&m, "config set --env always_yes true");
- status += micromamba(&m, "install conda-build");
+ status += micromamba(m, "config set --env always_yes true");
+ status += micromamba(m, "install conda-build pandoc");
+
+ return status;
+}
+
+int indexer_conda(struct Delivery *ctx, struct MicromambaInfo m) {
+ int status = 0;
+
status += micromamba(&m, "run conda index %s", ctx->storage.conda_artifact_dir);
return status;
}
@@ -825,8 +849,14 @@ int main(int argc, char *argv[]) {
mkdirs(ctx.storage.wheel_artifact_dir, 0755);
}
+ struct MicromambaInfo m;
+ if (micromamba_configure(&ctx, &m)) {
+ SYSERROR("%s", "Unable to configure micromamba");
+ exit(1);
+ }
+
msg(STASIS_MSG_L1, "Indexing conda packages\n");
- if (indexer_conda(&ctx)) {
+ if (indexer_conda(&ctx, m)) {
SYSERROR("%s", "Conda package indexing operation failed");
exit(1);
}