diff options
Diffstat (limited to 'mission/jwst')
| -rw-r--r-- | mission/jwst/Dockerfile.in | 14 |
1 files changed, 8 insertions, 6 deletions
diff --git a/mission/jwst/Dockerfile.in b/mission/jwst/Dockerfile.in index 4bfe90f..c360f9b 100644 --- a/mission/jwst/Dockerfile.in +++ b/mission/jwst/Dockerfile.in @@ -8,6 +8,7 @@ ARG DIST_URL=https://github.com/conda-forge/miniforge/releases/download/${DIST_V ARG CONDA_PACKAGES # Pipeline environment snapshot definition ARG SNAPSHOT_INPUT +ARG SNAPSHOT_PKGDIR # Declare environment ENV OPT=/opt \ HOME=/home/developer @@ -45,8 +46,6 @@ RUN groupadd developer \ && useradd -g developer -m -d $HOME -s /bin/bash developer \ && echo "developer:developer" | chpasswd \ && echo "developer ALL=(ALL) NOPASSWD: ALL" >> /etc/sudoers -# Get delivery snapshot -ADD ${SNAPSHOT_INPUT} ${HOME}/SNAPSHOT.yml # Install Miniforge # Reset permissions RUN curl -q -OSsL ${DIST_URL}/${DIST_INSTALLER} \ @@ -60,14 +59,17 @@ RUN curl -q -OSsL ${DIST_URL}/${DIST_INSTALLER} \ && chown -R developer: ${OPT} ${HOME} # Configure Conda ENV PATH "${DIST_PATH}/bin:${PATH}" +# Get delivery snapshot +ADD ${SNAPSHOT_INPUT} ${HOME}/SNAPSHOT.yml +ADD ${SNAPSHOT_PKGDIR} ${HOME}/packages +RUN chown -R developer: ${HOME} USER developer RUN conda config --set auto_update_conda false \ && conda config --set always_yes true \ && conda config --set quiet true \ - && conda config --set rollback_enabled false \ - && source /etc/profile.d/conda.sh \ - && source /etc/profile.d/mamba.sh \ - && mamba install \ + && conda config --set rollback_enabled false +RUN sed -i -e "s|@CONDA_CHANNEL@|${HOME}/packages/conda|;s|@PIP_ARGUMENTS@|--extra-index-url ${HOME}/packages/wheels|;" ${HOME}/SNAPSHOT.yml +RUN mamba install \ git \ ${CONDA_PACKAGES} \ && mamba env create -n linux --file ${HOME}/SNAPSHOT.yml |