Further improvements

1 files changed, 0 insertions, 165 deletions

diff --git a/bin/calfuse.csh b/bin/calfuse.csh
deleted file mode 100755
index 4a828d1..0000000
--- a/bin/calfuse.csh
+++ /dev/null
@@ -1,165 +0,0 @@
-#!/usr/local/bin/tcsh -f
-#******************************************************************************
-#*              Johns Hopkins University 
-#*              Center For Astrophysical Sciences
-#*              FUSE
-#******************************************************************************
-#*
-#* Synopsis:    calfuse.csh file_name 
-#*
-#* Description: Shell script for processing FUSE Ver 3.0 time-tagged exposures.
-#*		All messages are written to stdout or stderr.
-#*
-#* Arguments:   char    file_name	File name to process is 1st command-
-#*                                      line argument
-#*
-#* Returns:     Exit codes:
-#*			0		Successful execution
-#*			
-#*
-#* Environment variables:  CF_CALDIR    Path to directory which contains the
-#*                                      calibration files.
-#*                         CF_IDLDIR    Path to CalFUSE IDL directory
-#*                         CF_PIPELINE  Flag to determine if CALFUSE
-#*                                      is running as part of the JHU 
-#*                                      pipeline.
-#*
-#* History:     02/26/03   1.1   peb    Begin work on V3.0
-#*		03/19/03   1.2   wvd	Add IDL plots
-#*              03/31/03   1.3   peb    Add cf_ttag_countmap/gainmap programs
-#*                                      and changed the timestamp format to be
-#*                                      similar to cf_timestamp
-#*		05/16/03   1.4   wvd	Distinguish between TTAG and HIST files.
-#*					Changed name to calfuse.csh
-#*		05/22/03   1.5   wvd	Direct STDERR to trailer file.
-#*              06/03/03   1.6   rdr    Incorporated bad pixel map
-#*              06/09/03   1.7   rdr    Do not screen on timing flags for HIST
-#*                                      data processed behind the firewall
-#*		07/31/03   1.8   wvd	Check error status before exiting.
-#*		09/15/03   1.9   wvd	Write BEGIN and END stmts to logfile.
-#*		12/08/03   1.10  wvd	For HIST data, always call
-#*					cf_extract_spectra and cf_bad_pixels
-#*					with -s option.
-#*		12/21/03   1.13  wvd	Remove underscore from idf and bpm
-#*					filenames.
-#*		04/22/04   1.12  wvd	Change name of trailer file to
-#*					{$froot}.trl
-#*		05/12/04   1.13  wvd	Remove cf_ttag_countmap and
-#*					cf_ttag_gainmap from pipeline.
-#*		06/01/04   1.14  wvd	For HIST data, no longer need to call
-#*					cf_extract_spectra with -s option.
-#*		06/03/04   1.15  wvd	Screening step now follows "Convert
-#*					to FARF."
-#*
-#*****************************************************************************/
-
-# Delete files after processing?  (Default is no.)
-#set DELETE_IDF  		# Delete intermediate data file
-#set DELETE_BPM			# Delete bad-pixel map
-
-set idf     = ${1:s/raw/idf/}
-set froot   = ${1:s/raw.fit//}
-set logfile = {$froot}.trl
-set ttag    = `echo $froot | grep -c ttag` 
-
-# Put a timestamp in the log file (the OPUS trailer file).
-if $ttag then
-    echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: Begin TTAG file $1"
-    echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: Begin TTAG file $1" >>& $logfile
-else
-    echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: Begin HIST file $1"
-    echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: Begin HIST file $1" >>& $logfile
-endif
-
-set cfstat=0
-
-# Step 1  --  Generate Intermediate Data File
-if $ttag then
-    cf_ttag_init            $1    $idf    >>& $logfile
-    set cfstat=$status
-else
-    cf_hist_init            $1    $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-# Step 2  --  Convert to FARF
-if ! $cfstat then
-    cf_convert_to_farf        $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-# Step 3  --  Screen photons
-if ! $cfstat then
-    cf_screen_photons         $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-# Step 4  --  Remove motions
-if ! $cfstat then
-    cf_remove_motions         $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-if ! $cfstat then
-	if ($?CF_IDLDIR) then
-		idlplot_rate.pl {$froot}	>>& $logfile
-                idlplot_spex.pl {$froot}        >>& $logfile
-	endif
-endif
-
-# Step 5  --  Assign wavelength
-if ! $cfstat then
-    cf_assign_wavelength      $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-# Step 6  --  Flux calibrate
-if ! $cfstat then
-    cf_flux_calibrate         $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-# Step 7 -- Create a bad-pixel file
-if ! $cfstat then
-    cf_bad_pixels        $idf    >>& $logfile
-    set cfstat=$status
-endif
-
-# Step 8  --  Extract spectra
-if ! $cfstat then
-    cf_extract_spectra        $idf    >>& $logfile
-    set cfstat=$status  
-endif
-
-# Step 8a --  Delete _bursts.dat file
-if ! $?CF_PIPELINE then
-    rm -f ${1:r:s/ttagfraw/_bursts/}.dat
-endif
-
-# Step 8b --  Delete IDF file
-if $?DELETE_IDF then
-    echo "NOTE: Deleting intermediate data file."
-    rm $idf
-endif
-
-# Step 8c --  Delete bad pixel map (bpm) file
-if $?DELETE_BPM then
-    echo "NOTE: Deleting bad pixel map (bpm) file."
-    rm -f ${1:s/raw/bpm/}
-endif
-
-if ! $cfstat then
- if $ttag then
-  echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: End   TTAG file $1"
-  echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: End   TTAG file $1" >>& $logfile
- else
-  echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: End   HIST file $1"
-  echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: End   HIST file $1" >>& $logfile
- endif
-else
-  echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: Error processing $1"
-  echo `date '+%Y %b %e %T'` "calfuse.csh-1.15: Error processing $1" >>& $logfile
-endif
-exit($cfstat)
-
-#******************************************************************************