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authorJoseph Hunkeler <jhunkeler@gmail.com>2015-07-08 20:46:52 -0400
committerJoseph Hunkeler <jhunkeler@gmail.com>2015-07-08 20:46:52 -0400
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+.help darkcombine Aug91 noao.imred.ccdred
+.ih
+NAME
+darkcombine -- Combine and process dark count images
+.ih
+USAGE
+darkcombine input
+.ih
+PARAMETERS
+.ls input
+List of dark count images to combine. The \fIccdtype\fR parameter
+may be used to select the zero level images from a list containing all
+types of data.
+.le
+.ls output = "Dark"
+Output dark count root image name.
+.le
+.ls combine = "average" (average|median)
+Type of combining operation performed on the final set of pixels (after
+rejection). The choices are
+"average" or "median". The median uses the average of the two central
+values when the number of pixels is even.
+.le
+.ls reject = "minmax" (none|minmax|ccdclip|crreject|sigclip|avsigclip|pclip)
+Type of rejection operation. See \fBcombine\fR for details.
+.le
+.ls ccdtype = "dark"
+CCD image type to combine. If no image type is given then all input images
+are combined.
+.le
+.ls process = yes
+Process the input images before combining?
+.le
+.ls delete = no
+Delete input images after combining? Only those images combined are deleted.
+.le
+.ls clobber = no
+Clobber existing output images?
+.le
+.ls scale = "exposure" (none|mode|median|mean|exposure)
+Multiplicative image scaling to be applied. The choices are none, scale
+by the mode, median, or mean of the specified statistics section, or scale
+by the exposure time given in the image header.
+.le
+.ls statsec = ""
+Section of images to use in computing image statistics for scaling.
+If no section is given then the entire region of the image is
+sampled (for efficiency the images are sampled if they are big enough).
+.le
+
+.ce
+Algorithm Parameters
+.ls nlow = 0, nhigh = 1 (minmax)
+The number of low and high pixels to be rejected by the "minmax" algorithm.
+.le
+.ls nkeep = 1
+The minimum number of pixels to retain or the maximum number to reject
+when using the clipping algorithms (ccdclip, crreject, sigclip,
+avsigclip, or pclip). When given as a positive value this is the minimum
+number to keep. When given as a negative value the absolute value is
+the maximum number to reject. This is actually converted to a number
+to keep by adding it to the number of images.
+.le
+.ls mclip = yes (ccdclip, crreject, sigclip, avsigcliip)
+Use the median as the estimate for the true intensity rather than the
+average with high and low values excluded in the "ccdclip", "crreject",
+"sigclip", and "avsigclip" algorithms? The median is a better estimator
+in the presence of data which one wants to reject than the average.
+However, computing the median is slower than the average.
+.le
+.ls lsigma = 3., hsigma = 3. (ccdclip, crreject, sigclip, avsigclip, pclip)
+Low and high sigma clipping factors for the "ccdclip", "crreject", "sigclip",
+"avsigclip", and "pclip" algorithms. They multiply a "sigma" factor
+produced by the algorithm to select a point below and above the average or
+median value for rejecting pixels. The lower sigma is ignored for the
+"crreject" algorithm.
+.le
+.ls rdnoise = "0.", gain = "1.", snoise = "0." (ccdclip, crreject)
+CCD readout noise in electrons, gain in electrons/DN, and sensitivity noise
+as a fraction. These parameters are used with the "ccdclip" and "crreject"
+algorithms. The values may be either numeric or an image header keyword
+which contains the value.
+.le
+.ls pclip = -0.5 (pclip)
+Percentile clipping algorithm parameter. If greater than
+one in absolute value then it specifies a number of pixels above or
+below the median to use for computing the clipping sigma. If less
+than one in absolute value then it specifies the fraction of the pixels
+above or below the median to use. A positive value selects a point
+above the median and a negative value selects a point below the median.
+The default of -0.5 selects approximately the quartile point.
+See \fBcombine\fR for further details.
+.le
+.ls blank = 0.
+Output value to be used when there are no pixels.
+.le
+.ih
+DESCRIPTION
+The dark count images in the input image list are combined.
+The input images may be processed first if desired.
+The original images may be deleted automatically if desired.
+The output pixel datatype will be real.
+
+This task is a script which applies \fBccdproc\fR and \fBcombine\fR. The
+parameters and combining algorithms are described in detail in the help for
+\fBcombine\fR. This script has default parameters specifically set for
+dark count images and simplifies the combining parameters. There are other
+combining options not included in this task. For these additional
+features, such as thresholding, offseting, masking, and projecting, use
+\fBcombine\fR.
+.ih
+EXAMPLES
+1. The image data contains four dark count images. To automatically select
+them and combine them as a background job using the default combining algorithm:
+
+ cl> darkcombine ccd*.imh&
+.ih
+SEE ALSO
+ccdproc, combine
+.endhelp