1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
|
include <imhdr.h>
include <pkg/gtools.h>
include <pkg/rg.h>
include <math/curfit.h>
include <error.h>
include <smw.h>
# SFIT -- Fit a function to spectra and output the fit, difference or
# ratio; or print the power series coefficients of the fit. The fitting
# parameters may be set interactively using the icfit package.
# Image header keywords for saving the previous fit
define SFT_KW "SFIT"
define SFT_KWB "SFITB"
# Choices for the type of output
define OUT_TYPES "|data|fit|difference|ratio|"
define DATA 1
define FIT 2
define DIFFERENCE 3
define RATIO 4
# Choices for the interactive prompts
# (the 1st define is for clgwrd (strdic), the 2nd for CL enumeration)
# Note that the CL assumes that the separator is `|'.
define SFT_ANS1 "|yes|no|skip|YES|NO|SKIP|"
define SFT_ANS1X "yes|no|skip|YES|NO|SKIP"
define SFT_ANS2 "|spectrum|image|all|cancel|"
define SFT_ANS2X "spectrum|image|all|cancel"
define LEN_ANS 7
define YES_ONCE 1
define NO_ONCE 2
define SKIP_ONCE 3
define YES_ALWAYS 4
define NO_ALWAYS 5
define SKIP_ALWAYS 6
define SKIP_SPEC 1
define SKIP_IMAGE 2
define SKIP_ALL 3
define SKIP_CANCEL 4
# Switches and pointers
define SFT_OFF 22
define INTERACTIVE Memi[$1] # all spectra are noninteractive
define REPLACE Memi[$1+1] # replace rejected points?
define WAVESCALE Memi[$1+2] # X is wavelength if possible
define LOGSCALE Memi[$1+3] # axes are logarithmic
define OVERRIDE Memi[$1+4] # allow lines to be redone
define LISTONLY Memi[$1+5] # don't modify images
define OUTTYPE Memi[$1+6] # output type code
define GRAPH_OPEN Memi[$1+7] # keep track of gopen
define LOG_TO_STDOUT Memi[$1+8] # STDOUT/ERR is used
define PROMPT Memi[$1+9] # prompt flag
define QUIET Memi[$1+10] # quiet flag
define RGIN Memi[$1+11] # lines specified
define RGFIT Memi[$1+12] # all lines to fit
define RGREFIT Memi[$1+13] # those to fit again
define RGINB Memi[$1+14] # bands specified
define RGFITB Memi[$1+15] # all bands to fit
define RGREFITB Memi[$1+16] # those to fit again
define NLOGFD Memi[$1+17] # number of logfiles
define LOGFD Memi[$1+18] # array of logfiles
define IC Memi[$1+19] # current ic descriptor
define YMAX Memi[$1+20] # max number of lines
define BMAX Memi[$1+21] # max number of lines
define IC_DESC Memi[$1+SFT_OFF+($3-1)*YMAX($1)+$2-1] # ic descriptors
# T_SFIT -- Entry point for the task. Read parameters,
# initialize structures and loop over the image templates.
procedure t_sfit ()
pointer listin, listout, input, output, graphics
pointer sf, gp, gt, in, out, mw, sh, sp
int stat
int sft_icfit(), imtgetim(), gt_init(), imtlen()
bool clgetb()
pointer imtopenp()
begin
call smark (sp)
call salloc (input, SZ_FNAME, TY_CHAR)
call salloc (output, SZ_FNAME, TY_CHAR)
call salloc (graphics, SZ_FNAME, TY_CHAR)
# Open the image templates
listin = imtopenp ("input")
if (clgetb ("listonly"))
listout = NULL
else {
listout = imtopenp ("output")
if (imtlen (listin) != imtlen (listout)) {
call imtclose (listin)
call imtclose (listout)
call sfree (sp)
call error (1, "Input and output image lists do not match")
}
}
# Initialize the various descriptors
iferr (call sft_init (listin, listout, sf)) {
call imtclose (listin)
if (listout != NULL)
call imtclose (listout)
call sfree (sp)
call erract (EA_ERROR)
}
# The graphics pointers are passed explicitly
if (INTERACTIVE(sf) == YES) {
call clgstr ("graphics", Memc[graphics], SZ_FNAME)
gt = gt_init()
call gt_sets (gt, GTTYPE, "line")
}
# Fit the lines in each input image.
while (imtgetim (listin, Memc[input], SZ_FNAME) != EOF) {
if (listout != NULL)
stat = imtgetim (listout, Memc[output], SZ_FNAME)
else
call strcpy (Memc[input], Memc[output], SZ_FNAME)
iferr {
call sft_immap (Memc[input], Memc[output],
in, out, mw, sh, sf, gp)
} then {
call erract (EA_WARN)
next
}
stat = sft_icfit (in, out, mw, sh, sf, gp, gt, Memc[graphics])
call sft_unmap (in, out, mw, sh, sf)
if (stat == EOF)
break
}
if (INTERACTIVE(sf) == YES)
call gt_free (gt)
if (GRAPH_OPEN(sf) == YES)
call gclose (gp)
call sft_close (sf)
call imtclose (listin)
if (listout != NULL)
call imtclose (listout)
call sfree (sp)
end
# SFT_INIT -- Initialize templates, ranges, logfiles, type, icfit descriptors.
procedure sft_init (listin, listout, sf)
pointer listin, listout #I Image template descriptors
pointer sf #I Pointer to task switches
pointer input, output, im, sp, mw
int ymax, bmax, i, j
real clgetr()
bool clgetb()
int clgwrd(), clgeti(), btoi(), strlen()
int rg_next(), imtgetim(), imaccess(), xt_logopen()
pointer rg_ranges(), immap(), smw_openim()
errchk immap, smw_openim
begin
call smark (sp)
call salloc (input, SZ_LINE, TY_CHAR)
call salloc (output, SZ_FNAME, TY_CHAR)
sf = NULL
iferr {
# find the maximum number of lines and bands (spectra)
ymax = 0
bmax = 0
while (imtgetim (listin, Memc[input], SZ_LINE) != EOF)
if (imaccess (Memc[input], READ_ONLY) == YES) {
im = immap (Memc[input], READ_ONLY, 0)
mw = smw_openim (im)
ymax = max (SMW_LLEN(mw,2), ymax)
bmax = max (SMW_LLEN(mw,3), bmax)
call smw_close (mw)
call imunmap (im)
}
call imtrew (listin)
if (listout != NULL) {
while (imtgetim (listout, Memc[output], SZ_FNAME) != EOF)
if (imaccess (Memc[output], READ_ONLY) == YES) {
im = immap (Memc[output], READ_ONLY, 0)
mw = smw_openim (im)
ymax = max (SMW_LLEN(mw,2), ymax)
bmax = max (SMW_LLEN(mw,3), bmax)
call smw_close (mw)
call imunmap (im)
}
call imtrew (listout)
}
# allocate space for the task switch structure
call malloc (sf, SFT_OFF + ymax * bmax, TY_STRUCT)
YMAX(sf) = ymax
BMAX(sf) = bmax
# NULL the pointers for error handling
RGIN(sf) = NULL
RGINB(sf) = NULL
NLOGFD(sf) = 0
do j = 1, BMAX(sf)
do i = 1, YMAX(sf)
IC_DESC(sf,i,j) = NULL
# Set the switches
INTERACTIVE(sf) = btoi (clgetb ("interactive"))
REPLACE(sf) = btoi (clgetb ("replace"))
WAVESCALE(sf) = btoi (clgetb ("wavescale"))
LOGSCALE(sf) = btoi (clgetb ("logscale"))
OVERRIDE(sf) = btoi (clgetb ("override"))
LISTONLY(sf) = btoi (clgetb ("listonly"))
GRAPH_OPEN(sf) = NO
PROMPT(sf) = INTERACTIVE(sf)
QUIET(sf) = btoi (INTERACTIVE(sf) == NO)
# Expand the range specification, allow either hyphens or colons
call clgstr ("lines", Memc[input], SZ_LINE)
do i = 1, strlen (Memc[input])
if (Memc[input+i-1] == '-')
Memc[input+i-1] = ':'
else if (Memc[input+i-1] == 'x' || Memc[input+i-1] == 'X')
call error (1, "Range step (`x' notation) not implemented")
RGIN(sf) = rg_ranges (Memc[input], 1, YMAX(sf))
call rg_order (RGIN(sf))
call rg_merge (RGIN(sf))
call clgstr ("bands", Memc[input], SZ_LINE)
do i = 1, strlen (Memc[input])
if (Memc[input+i-1] == '-')
Memc[input+i-1] = ':'
else if (Memc[input+i-1] == 'x' || Memc[input+i-1] == 'X')
call error (1, "Range step (`x' notation) not implemented")
RGINB(sf) = rg_ranges (Memc[input], 1, BMAX(sf))
call rg_order (RGINB(sf))
call rg_merge (RGINB(sf))
i = 0
j = 0
if (rg_next (RGIN(sf), i) == EOF || rg_next (RGINB(sf), j) == EOF)
call error (1, "With range specification for `lines or bands'")
else {
# Open the initial icfit descriptor
call ic_open (IC(sf))
call clgstr ("sample", Memc[input], SZ_LINE)
call ic_pstr (IC(sf), "sample", Memc[input])
call clgstr ("function", Memc[input], SZ_LINE)
call ic_pstr (IC(sf), "function", Memc[input])
call ic_puti (IC(sf), "naverage", clgeti ("naverage"))
call ic_puti (IC(sf), "order", clgeti ("order"))
call ic_putr (IC(sf), "low", clgetr ("low_reject"))
call ic_putr (IC(sf), "high", clgetr ("high_reject"))
call ic_puti (IC(sf), "niterate", clgeti ("niterate"))
call ic_putr (IC(sf), "grow", clgetr ("grow"))
call ic_puti (IC(sf), "markrej", btoi (clgetb ("markrej")))
IC_DESC(sf,i,j) = IC(sf)
}
# Get the desired output type
OUTTYPE(sf) = clgwrd ("type", Memc[input], SZ_LINE, OUT_TYPES)
# Open the logfiles
NLOGFD(sf) = xt_logopen ("logfiles", "SFIT:", LOGFD(sf),
LOG_TO_STDOUT(sf))
} then {
call sfree (sp)
call sft_close (sf)
call erract (EA_ERROR)
}
call sfree (sp)
return
end
# SFT_CLOSE -- Close the various descriptors.
procedure sft_close (sf)
pointer sf #I Pointer to task switches
int i, j
begin
if (sf != NULL) {
if (RGIN(sf) != NULL)
call rg_free (RGIN(sf))
if (RGINB(sf) != NULL)
call rg_free (RGINB(sf))
if (NLOGFD(sf) != 0)
call xt_logclose (LOGFD(sf), NLOGFD(sf), "END:")
do j = 1, BMAX(sf)
do i = 1, YMAX(sf)
if (IC_DESC(sf,i,j) != NULL)
call ic_closer (IC_DESC(sf,i,j))
call mfree (sf, TY_STRUCT)
}
end
# SFT_IMMAP -- Map images for sfit.
procedure sft_immap (input, output, in, out, mw, sh, sf, gp)
char input[ARB] #I Input image name
char output[ARB] #I Output image name
pointer in, out #O IMIO pointers
pointer mw #O MWCS pointer
pointer sh #O SHDR pointer
pointer sf #I Pointer for task switches
pointer gp #I GIO pointer
int i, ax1, ax2, ax3
pointer inroot, insect, outroot, outsect, b1, b2
pointer sp, inranges, outranges
pointer rgin, rgout, rgtmp, rgtmpb
long v1[IM_MAXDIM], v2[IM_MAXDIM]
char emsg[SZ_LINE]
int imaccess(), imaccf(), imgnlr(), impnlr(), strcmp()
pointer immap(), smw_openim()
pointer rg_ranges(), rg_window(), rg_union(), rg_intersect()
errchk immap, smw_openim
define err_ 13
begin
call smark (sp)
call salloc (inroot, SZ_FNAME, TY_CHAR)
call salloc (insect, SZ_FNAME, TY_CHAR)
call salloc (outroot, SZ_FNAME, TY_CHAR)
call salloc (outsect, SZ_FNAME, TY_CHAR)
call salloc (inranges, SZ_LINE, TY_CHAR)
call salloc (outranges, SZ_LINE, TY_CHAR)
in = NULL
out = NULL
mw = NULL
sh = NULL
RGFIT(sf) = NULL
RGREFIT(sf) = NULL
RGFITB(sf) = NULL
RGREFITB(sf) = NULL
call imgimage (input, Memc[inroot], SZ_FNAME)
call imgsection (input, Memc[insect], SZ_FNAME)
call imgimage (output, Memc[outroot], SZ_FNAME)
call imgsection (output, Memc[outsect], SZ_FNAME)
if (Memc[insect] != EOS || Memc[outsect] != EOS) {
call sprintf (emsg, SZ_LINE, "Sections not allowed (%s --> %s)")
call pargstr (input)
call pargstr (output)
goto err_
} else if (imaccess (Memc[inroot], READ_ONLY) == NO) {
call sprintf (emsg, SZ_LINE, "Cannot access %s")
call pargstr (input)
goto err_
} else if (LISTONLY(sf) == YES) {
# The `out = in' allows the ranges code at the end of this
# procedure to cover all cases (with a little inefficiency).
# No check on the sizes of the input and output images.
in = immap (Memc[inroot], READ_ONLY, 0)
out = in
} else if (strcmp (Memc[inroot], Memc[outroot]) == 0) {
# Overwrite the input image.
in = immap (Memc[inroot], READ_WRITE, 0)
out = in
} else if (imaccess (Memc[outroot], READ_WRITE) == NO) {
in = immap (Memc[inroot], READ_ONLY, 0)
out = immap (Memc[outroot], NEW_COPY, in)
if (IM_PIXTYPE(out) != TY_DOUBLE)
IM_PIXTYPE(out) = TY_REAL
# Do this since imcopy is unimplemented
call amovkl (long(1), v1, IM_MAXDIM)
call amovkl (long(1), v2, IM_MAXDIM)
while (imgnlr (in, b1, v1) != EOF && impnlr (out, b2, v2) != EOF)
call amovr (Memr[b1], Memr[b2], IM_LEN(in, 1))
} else {
in = immap (Memc[inroot], READ_ONLY, 0)
out = immap (Memc[outroot], READ_WRITE, 0)
# This relies on the axes beyond IM_NDIM(im) being unity
do i = 1, max (IM_NDIM(in), IM_NDIM(out))
if (IM_LEN(in, i) != IM_LEN(out, i)) {
call sprintf (emsg, SZ_LINE, "%s & %s aren't the same size")
call pargstr (Memc[inroot])
call pargstr (Memc[outroot])
goto err_
}
}
do i = 4, IM_NDIM(in)
if (IM_LEN(in, i) != 1) {
call sprintf (emsg, SZ_LINE, "Too many dimensions for %s")
call pargstr (Memc[inroot])
goto err_
}
if (imaccf (in, SFT_KW) == YES)
call imgstr (in, SFT_KW, Memc[inranges], SZ_LINE)
else
call strcpy ("", Memc[inranges], SZ_LINE)
if (imaccf (out, SFT_KW) == YES)
call imgstr (out, SFT_KW, Memc[outranges], SZ_LINE)
else {
call strcpy ("", Memc[outranges], SZ_LINE)
call imastr (out, SFT_KW, Memc[outranges])
}
mw = smw_openim (in)
ax1 = SMW_LLEN(mw,1)
ax2 = SMW_LLEN(mw,2)
ax3 = SMW_LLEN(mw,3)
rgin = rg_ranges (Memc[inranges], 1, ax2)
rgout = rg_ranges (Memc[outranges], 1, ax2)
rgtmp = rg_union (rgin, rgout)
call rg_free (rgin)
call rg_free (rgout)
if (imaccf (in, SFT_KWB) == YES)
call imgstr (in, SFT_KWB, Memc[inranges], SZ_LINE)
else
call strcpy ("", Memc[inranges], SZ_LINE)
if (imaccf (out, SFT_KWB) == YES)
call imgstr (out, SFT_KWB, Memc[outranges], SZ_LINE)
else {
call strcpy ("", Memc[outranges], SZ_LINE)
call imastr (out, SFT_KWB, Memc[outranges])
}
rgin = rg_ranges (Memc[inranges], 1, ax3)
rgout = rg_ranges (Memc[outranges], 1, ax3)
rgtmpb = rg_union (rgin, rgout)
call rg_free (rgin)
call rg_free (rgout)
if (OVERRIDE(sf) == YES) {
RGFIT(sf) = rg_window (RGIN(sf), 1, ax2)
RGREFIT(sf) = rgtmp
RGFITB(sf) = rg_window (RGINB(sf), 1, ax3)
RGREFITB(sf) = rgtmpb
} else {
call rg_inverse (rgtmp, 1, ax2)
RGFIT(sf) = rg_intersect (RGIN(sf), rgtmp)
RGREFIT(sf) = rg_ranges ("0", 1, 2)
call rg_free (rgtmp)
#call rg_inverse (rgtmpb, 1, ax3)
#RGFITB(sf) = rg_intersect (RGINB(sf), rgtmpb)
#RGREFITB(sf) = rg_ranges ("0", 1, 2)
#call rg_free (rgtmpb)
RGFITB(sf) = rg_window (RGINB(sf), 1, ax3)
RGREFITB(sf) = rgtmpb
}
if (RG_NPTS(RGFIT(sf)) <= 0) {
call sprintf (emsg, SZ_LINE, "No lines left to fit for %s")
call pargstr (Memc[inroot])
goto err_
}
call sfree (sp)
return
err_ call sfree (sp)
call sft_unmap (in, out, mw, sh, sf)
if (GRAPH_OPEN(sf) == YES) {
call gclose (gp)
GRAPH_OPEN(sf) = NO
}
# STDERR should get flushed AFTER closing graphics
call error (1, emsg)
end
# SFT_UNMAP -- Unmap images for sfit.
procedure sft_unmap (in, out, mw, sh, sf)
pointer in, out #I IMIO pointers
pointer mw #I MWCS pointer
pointer sh #I SHDR pointer
pointer sf #I Task structure pointer
begin
call shdr_close (sh)
if (mw != NULL)
call smw_close (mw)
if (out != NULL && out != in)
call imunmap (out)
if (in != NULL)
call imunmap (in)
if (RGFIT(sf) != NULL)
call rg_free (RGFIT(sf))
if (RGREFIT(sf) != NULL)
call rg_free (RGREFIT(sf))
if (RGFITB(sf) != NULL)
call rg_free (RGFITB(sf))
if (RGREFITB(sf) != NULL)
call rg_free (RGREFITB(sf))
end
# SFT_ICFIT -- Given the image descriptors determine the fitting function
# for each line and output the fit, difference, ratio or coefficients.
int procedure sft_icfit (in, out, mw, sh, sf, gp, gt, graphics)
pointer in, out #I IMIO pointers
pointer mw #I MWCS pointer
pointer sh #I SHDR pointer
pointer sf #I Pointer for task switches
pointer gp #I GIO pointer
pointer gt #I GTOOLS pointer
char graphics[ARB] #I Graphics device
pointer sp, wts, cv, data
int line, band, i, j, n
int sft_getline()
pointer gopen(), imps3r()
real sft_efncr()
extern sft_efncr
begin
call smark (sp)
call salloc (wts, SMW_LLEN(mw,1), TY_REAL)
line = 0
band = 0
while (sft_getline (in, mw, sh, sf, gt, line, band) != EOF) {
call amovkr (1., Memr[wts], SN(sh))
if (QUIET(sf) == NO) {
if (GRAPH_OPEN(sf) == NO) {
gp = gopen (graphics, NEW_FILE, STDGRAPH)
GRAPH_OPEN(sf) = YES
}
call icg_fit (IC(sf), gp, "cursor", gt, cv, Memr[SX(sh)],
Memr[SY(sh)], Memr[wts], SN(sh))
} else
call ic_fit (IC(sf), cv, Memr[SX(sh)], Memr[SY(sh)],
Memr[wts], SN(sh), YES, YES, YES, YES)
if (LISTONLY(sf) == NO) {
i = LINDEX(sh,1)
j = LINDEX(sh,2)
n = SMW_LLEN(mw,1)
switch (SMW_LAXIS(mw,1)) {
case 1:
data = imps3r (out, 1, n, i, i, j, j)
case 2:
data = imps3r (out, i, i, 1, n, j, j)
case 3:
data = imps3r (out, i, i, j, j, 1, n)
}
if (SN(sh) < n)
call aclrr (Memr[data], n)
switch (OUTTYPE(sf)) {
case DATA:
if (REPLACE(sf) == YES)
call ic_clean (IC(sf), cv, Memr[SX(sh)], Memr[SY(sh)],
Memr[wts], SN(sh))
call amovr (Memr[SY(sh)], Memr[data], SN(sh))
call sft_update (out, mw, line, band)
case FIT:
call cvvector (cv, Memr[SX(sh)], Memr[data], SN(sh))
call sft_update (out, mw, line, band)
case DIFFERENCE:
call cvvector (cv, Memr[SX(sh)], Memr[data], SN(sh))
if (REPLACE(sf) == YES)
call ic_clean (IC(sf), cv, Memr[SX(sh)], Memr[SY(sh)],
Memr[wts], SN(sh))
call asubr (Memr[SY(sh)], Memr[data], Memr[data], SN(sh))
call sft_update (out, mw, line, band)
case RATIO:
call cvvector (cv, Memr[SX(sh)], Memr[data], SN(sh))
if (REPLACE(sf) == YES)
call ic_clean (IC(sf), cv, Memr[SX(sh)], Memr[SY(sh)],
Memr[wts], SN(sh))
call advzr (Memr[SY(sh)], Memr[data], Memr[data], SN(sh),
sft_efncr)
call sft_update (out, mw, line, band)
default:
call error (1, "bad switch in sft_icfit")
}
}
call sft_power (in, line, cv, gp, sf)
call cvfree (cv)
}
# This terminates the cursor (GIN) mode echoplex suppression in
# case the next sft_immap generates a password prompt from ZFIOKS.
# Note that any such password prompt (from the kernel!) will
# now show up on the status line, not the graphics plane.
if (GRAPH_OPEN(sf) == YES) {
call printf ("\r")
call flush (STDOUT)
}
call sfree (sp)
return (line)
end
# SFT_GETLINE -- Get image data to be fit. Returns the line and band numbers.
# Returns EOF when done.
int procedure sft_getline (in, mw, sh, sf, gt, line, band)
pointer in #I IMIO pointer
pointer mw #I MWCS pointer
pointer sh #I SHDR pointer
pointer sf #I Pointer for task switches
pointer gt #I GTOOLS pointer
int line #U Line number
int band #U Band number
int i
bool waveok
char ask[LEN_ANS]
pointer linebuf, rg1, rg2, sp
int clgwrd(), rg_next(), rg_inrange()
pointer rg_ranges(), rg_intersect()
real sft_efncr()
extern sft_efncr
errchk shdr_open
define again_ 99
begin
call smark (sp)
call salloc (linebuf, SZ_LINE, TY_CHAR)
if (band == 0)
if (rg_next (RGFITB(sf), band) == EOF)
return (EOF)
again_ if (rg_next (RGFIT(sf), line) == EOF) {
line = 0
if (rg_next (RGFITB(sf), band) == EOF)
return (EOF)
goto again_
}
if (PROMPT(sf) == YES) {
call clprintf ("ask.p_min", "%s")
call pargstr (SFT_ANS1X)
if (rg_inrange (RGREFIT(sf), line) == YES &&
rg_inrange (RGREFITB(sf), band) == YES) {
call clprintf ("ask.p_prompt",
"Refit [%d,%d] of %s w/ graph? ")
} else {
call clprintf ("ask.p_prompt",
"Fit [%d,%d] of %s w/ graph? ")
}
call pargi (line)
call pargi (band)
call pargstr (IM_HDRFILE(in))
switch (clgwrd ("ask", ask, LEN_ANS, SFT_ANS1)) {
case YES_ONCE:
QUIET(sf) = NO
case NO_ONCE:
QUIET(sf) = YES
case SKIP_ONCE:
goto again_
case YES_ALWAYS:
QUIET(sf) = NO
PROMPT(sf) = NO
case NO_ALWAYS:
QUIET(sf) = YES
PROMPT(sf) = NO
case SKIP_ALWAYS:
call clprintf ("ask", "cancel")
call clprintf ("ask.p_min", "%s")
call pargstr (SFT_ANS2X)
call clprintf ("ask.p_prompt",
"Skip what? (`all' to exit task) ")
switch (clgwrd ("ask", ask, LEN_ANS, SFT_ANS2)) {
case SKIP_SPEC:
call clprintf ("ask", "yes")
# delete the spectrum from the list
call sprintf (Memc[linebuf], SZ_LINE, "%d")
call pargi (line)
rg1 = rg_ranges (Memc[linebuf], 1, SMW_LLEN(mw,2))
call rg_inverse (rg1, 1, SMW_LLEN(mw,2))
rg2 = rg_intersect (RGIN(sf), rg1)
call rg_free (rg1)
call rg_free (RGIN(sf))
RGIN(sf) = rg2
goto again_
case SKIP_IMAGE:
call clprintf ("ask", "yes")
return (EOF)
case SKIP_ALL:
call clprintf ("ask", "yes")
return (EOF)
case SKIP_CANCEL:
call clprintf ("ask", "yes")
line = line - 1
goto again_
default:
call error (1, "bad switch (2) in sft_getline")
}
default:
call error (1, "bad switch (1) in sft_getline")
}
}
call shdr_open (in, mw, line, band, INDEFI, SHDATA, sh)
if (LOGSCALE(sf) == YES)
call alogr (Memr[SY(sh)], Memr[SY(sh)], SN(sh), sft_efncr)
if (WAVESCALE(sf) == YES) {
waveok = true
} else
waveok = false
if (!waveok)
do i = 1, SN(sh)
Memr[SX(sh)+i-1] = i
if (LOGSCALE(sf) == YES)
call alogr (Memr[SX(sh)], Memr[SX(sh)], SN(sh), sft_efncr)
# Initialize and/or update the icfit descriptor
if (IC_DESC(sf,line,band) == NULL) {
call ic_open (IC_DESC(sf,line,band))
call ic_copy (IC(sf), IC_DESC(sf,line,band))
#call ic_pstr (IC_DESC(sf,line,band), "sample", "*")
}
IC(sf) = IC_DESC(sf,line,band)
call ic_putr (IC(sf), "xmin", min (Memr[SX(sh)], Memr[SX(sh)+SN(sh)-1]))
call ic_putr (IC(sf), "xmax", max (Memr[SX(sh)], Memr[SX(sh)+SN(sh)-1]))
if (QUIET(sf) == NO) {
if (waveok && LOGSCALE(sf) == YES) {
call ic_pstr (IC(sf), "xlabel", "log wavelength")
call ic_pstr (IC(sf), "ylabel", "log data")
} else if (LOGSCALE(sf) == YES) {
call ic_pstr (IC(sf), "xlabel", "log column")
call ic_pstr (IC(sf), "ylabel", "log data")
} else if (waveok) {
call ic_pstr (IC(sf), "xlabel", "wavelength")
call ic_pstr (IC(sf), "ylabel", "")
} else {
call ic_pstr (IC(sf), "xlabel", "column")
call ic_pstr (IC(sf), "ylabel", "")
}
call sprintf (Memc[linebuf], SZ_LINE, "%s, [%d,%d]\n%s")
call pargstr (IM_HDRFILE(in))
call pargi (line)
call pargi (band)
call pargstr (TITLE(sh))
call gt_sets (gt, GTTITLE, Memc[linebuf])
}
call sfree (sp)
return (OK)
end
# SFT_EFNCR -- Called by advzr on division by zero or by alogr for a
# zero or negative argument.
real procedure sft_efncr (x)
real x
begin
return (0.)
end
# SFT_POWER -- Transform the curfit output into a power series and
# print the coefficients to the logfiles. This should be modified to
# print the errors as well. That requires modifying the curfit routine
# cvpower to deal with errors; and adding an icfit routine (or include
# file define) that allows access to the dynamic arrays of sample points
# that are initialized if the sample is less than the whole set of points.
procedure sft_power (im, line, cv, gp, sf)
pointer im #I IMIO descriptor for labeling
int line #I Image line number for labeling
pointer cv #I CURFIT pointer
pointer gp #I GIO pointer for tidy output
pointer sf #I Pointer for task switches
pointer ps_coeff, linebuf, sp
int ncoeffs, i, j, fd
int cvstati(), strcmp()
begin
if (NLOGFD(sf) <= 0)
return
call smark (sp)
call salloc (linebuf, SZ_LINE, TY_CHAR)
# cvpower only works with legendre or chebyshev functions
call ic_gstr (IC(sf), "function", Memc[linebuf], SZ_LINE)
if (strcmp (Memc[linebuf], "legendre") != 0 &&
strcmp (Memc[linebuf], "chebyshev") != 0) {
call sfree (sp)
return
}
if (GRAPH_OPEN(sf) == YES && LOG_TO_STDOUT(sf) == YES) {
call gclose (gp)
GRAPH_OPEN(sf) = NO
}
ncoeffs = cvstati (cv, CVNCOEFF)
call salloc (ps_coeff, ncoeffs, TY_REAL)
call cvpower (cv, Memr[ps_coeff], ncoeffs)
do i = 1, NLOGFD(sf) {
fd = Memi[LOGFD(sf)+i-1]
call fprintf (fd, "Line %d of %s:\n\n")
call pargi (line)
call pargstr (IM_HDRFILE(im))
call fprintf (fd, " coeff value\n")
do j = 1, ncoeffs {
call fprintf (fd, "\t%d\t%12.5e\n")
call pargi (j)
call pargr (Memr[ps_coeff+j-1])
}
call fprintf (fd, "\n")
call flush (fd)
}
call sfree (sp)
end
# SFT_UPDATE -- Update the keyword with completed spectrum. Flush the pixels.
procedure sft_update (im, mw, line, band)
pointer im #I IMIO pointer
pointer mw #I MWCS pointer
int line #I Line just completed
int band #I Band just completed
pointer linebuf, rg1, rg2, rgold, sp
pointer rg_ranges(), rg_union()
begin
call smark (sp)
call salloc (linebuf, SZ_LINE, TY_CHAR)
# this could be recoded to use "rg_add"
call sprintf (Memc[linebuf], SZ_LINE, "%d")
call pargi (line)
rg1 = rg_ranges (Memc[linebuf], 1, SMW_LLEN(mw,2))
call imgstr (im, SFT_KW, Memc[linebuf], SZ_LINE)
rg2 = rg_ranges (Memc[linebuf], 1, SMW_LLEN(mw,2))
rgold = rg_union (rg1, rg2)
call rg_encode (rgold, Memc[linebuf], SZ_LINE)
call impstr (im, SFT_KW, Memc[linebuf])
call rg_free (rg1)
call rg_free (rg2)
call rg_free (rgold)
call sprintf (Memc[linebuf], SZ_LINE, "%d")
call pargi (band)
rg1 = rg_ranges (Memc[linebuf], 1, SMW_LLEN(mw,3))
call imgstr (im, SFT_KWB, Memc[linebuf], SZ_LINE)
rg2 = rg_ranges (Memc[linebuf], 1, SMW_LLEN(mw,3))
rgold = rg_union (rg1, rg2)
call rg_encode (rgold, Memc[linebuf], SZ_LINE)
call impstr (im, SFT_KWB, Memc[linebuf])
call rg_free (rg1)
call rg_free (rg2)
call rg_free (rgold)
call imflush (im)
call sfree (sp)
end
|