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|
#
# VODATA -- Query and Access VO Data Services
include <ctype.h>
include <error.h>
include <imhdr.h>
include <mwset.h>
include <tbset.h>
define DEBUG FALSE
define DEF_BASE "res"
define BP_NAMES "|any|radio|millimeter|infrared|optical|uv|x-ray|gamma-ray|"
define BP_ANY 1
define BP_RADIO 2
define BP_MILLIMETER 3
define BP_INFRARED 4
define BP_OPTICAL 5
define BP_UV 6
define BP_XRAY 7
define BP_GAMMARAY 8
define TYP_NAMES "|any|catalog|image|spectral|"
define TYP_ANY 1
define TYP_CATALOG 2
define TYP_IMAGE 3
define TYP_SPECTRAL 4
define OUT_FMTS "|ascii|csv|tsv|html|raw|fits|"
define FMT_ASCII 1
define FMT_CSV 2
define FMT_TSV 3
define FMT_HTML 4
define FMT_RAW 5
define FMT_FITS 6
# resources list of Resources to query (or "" or ServiceURL)
# objects list of Object names/images to query (or VOTable of positions)
# ra RA of query position
# dec Dec of query position
# sr Search radius (degrees, or min or sec)
#
# bandpass bandpass constraint (radio|infrared|optical|uv|xray|gamma)
# type service type to query (catalog|image)
# count print only a count of the results
# all query all data sources
# extract extract positions and URLs
#
# format output format (|fits|ascii|csv|tsv|html|raw)
# output output filename (or 'samp' to broadcast table)
# sequential use sequential file numbers (or object name)
#
# verbose verbose output?
#
procedure t_vodata ()
char resources[SZ_LINE], objects[SZ_FNAME]
char format[SZ_FNAME], verb[SZ_FNAME], output[SZ_FNAME]
char bandpass[SZ_FNAME], svctype[SZ_FNAME], dbgflag[SZ_FNAME]
char fmt[SZ_FNAME], sr[SZ_FNAME], allflag[SZ_FNAME]
char resdb[SZ_FNAME], resfile[SZ_FNAME], objfile[SZ_FNAME]
char pos[SZ_FNAME], size[SZ_FNAME], ivorn[SZ_FNAME], listflag[SZ_FNAME]
char sname[SZ_FNAME], url[SZ_FNAME], type[SZ_FNAME]
pointer sp, name, tout, old, new, extn
pointer cmd, bpass, stype
int fd, verbose, ndat
int objlist, reslist, nres, nobjs, n
bool quiet, do_samp, count, all
double ra, dec, srad
int clgeti(), strdic(), open(), imaccess(), vod_rename()
int access(), fntopnb(), fntgfnb(), fntlenb()
real clgetr()
bool clgetb(), streq(), rdb_lookup()
begin
call smark (sp)
call salloc (name, SZ_FNAME, TY_CHAR)
call salloc (tout, SZ_PATHNAME, TY_CHAR)
call salloc (old, SZ_PATHNAME, TY_CHAR)
call salloc (new, SZ_PATHNAME, TY_CHAR)
call salloc (cmd, SZ_PATHNAME, TY_CHAR)
call salloc (extn, SZ_PATHNAME, TY_CHAR)
call salloc (bpass, SZ_FNAME, TY_CHAR)
call salloc (stype, SZ_FNAME, TY_CHAR)
# Get the task parameters.
call clgstr ("resources", resources, SZ_LINE) # query params
all = clgetb ("all")
if (!all)
call clgstr ("objects", objects, SZ_LINE)
call clgstr ("size", sr, SZ_FNAME)
count = clgetb ("count")
verbose = clgeti ("verbose")
quiet = clgetb ("quiet")
do_samp = clgetb ("samp")
call clgstr ("output", output, SZ_FNAME) # output params
call clgstr ("format", format, SZ_FNAME)
call clgstr ("bandpass", bandpass, SZ_FNAME) # constraints
call clgstr ("type", svctype, SZ_FNAME)
call clgstr ("resdb", resdb, SZ_FNAME)
################################
# Build up arguments
################################
# Get the resources to query.
call mktemp ("/tmp/res", resfile, SZ_FNAME)
fd = open (resfile, NEW_FILE, TEXT_FILE)
if (resources[1] == EOS || streq (resources, "any")) {
call fprintf (fd, "any\n")
nres = INDEFI
call strcpy ("+l", listflag, SZ_FNAME)
} else {
reslist = fntopnb (resources, NO)
nres = fntlenb (reslist)
while (fntgfnb (reslist, Memc[name], SZ_FNAME) != EOF) {
if (rdb_lookup (resdb, Memc[name], type, sname, ivorn, url)) {
# Found an alias, print the unambiguous IVORN.
call fprintf (fd, "%s\n")
call pargstr (ivorn)
} else {
# Not an alias, let the task resolve it.
call fprintf (fd, "%s\n")
call pargstr (Memc[name])
}
}
call fntclsb (reslist)
call strcpy ("+n", listflag, SZ_FNAME)
}
call close (fd)
# Get the object names to query.
call mktemp ("/tmp/obj", objfile, SZ_FNAME)
fd = open (objfile, NEW_FILE, TEXT_FILE)
if (objects[1] != EOS) {
objlist = fntopnb (objects, NO)
nobjs = fntlenb (objlist)
while (fntgfnb (objlist, Memc[name], SZ_FNAME) != EOF) {
if (imaccess (Memc[name], READ_ONLY) == YES) {
call vod_img_query (Memc[name], ra, dec, srad, pos, size)
call fprintf (fd, "%g %g\n")
call pargd (ra)
call pargd (dec)
call sprintf (sr, SZ_FNAME, "%.6g")
call pargd (srad)
} else {
# Object name, let the task resolve it.
call fprintf (fd, "%s\n")
call pargstr (Memc[name])
}
}
call fntclsb (objlist)
} else {
# No names given, use the explicit position in the parameters.
nobjs = 1
call fprintf (fd, "%g %g\n")
call pargr (clgetr ("ra"))
call pargr (clgetr ("dec"))
}
call close (fd)
# FIXME -- In this release we're limited to image services for blind
# queries due to the catalog services querying non-std
# interfaces in VODATA>
# until we figure out the threading error problem.
if (IS_INDEFI(nres)) {
if (svctype[1] == EOS || !streq (svctype, "image")) {
call eprintf (
"Error: Blind resource queries limited to 'image' services\n")
return
}
}
# Check constraints.
call aclrc (Memc[bpass], SZ_FNAME)
if (bandpass[1] == EOS || bandpass[1] == NULL) {
call strcpy ("any", Memc[bpass], SZ_FNAME)
} else {
n = strdic (bandpass, Memc[bpass], SZ_FNAME, BP_NAMES)
if (!quiet && n == 0) {
call eprintf ("Invalid bandpass constraint '%s', ignoring.\n")
call pargstr (bandpass)
}
}
call aclrc (Memc[stype], SZ_FNAME)
if (svctype[1] == EOS || svctype[1] == NULL) {
call strcpy ("any", Memc[stype], SZ_FNAME)
} else {
n = strdic (svctype, Memc[stype], SZ_FNAME, TYP_NAMES)
if (!quiet && n == 0) {
call eprintf ("Invalid service constraint '%s', ignoring.\n")
call pargstr (svctype)
}
}
# Get output processing options.
call vod_get_format (format, fmt, Memc[extn])
if (IS_INDEFI(nres) || do_samp || all) {
# Unknown multiple resources.
call strcpy (output, Memc[tout], SZ_FNAME)
} else
call strcpy ("/tmp/vod", Memc[tout], SZ_FNAME)
if (output[1] == EOS)
call strcpy ("vod", output, SZ_FNAME) # set default name
call strcpy ("+n", verb, SZ_FNAME) # query verbosity
if (verbose > 1)
call strcpy ("-v", verb, SZ_FNAME)
if (verbose > 2)
call strcpy ("-vv", verb, SZ_FNAME)
if (all) # query all data svcs?
call strcpy ("-a", allflag, SZ_FNAME)
else
call strcpy ("+n", allflag, SZ_FNAME)
if (access ("/tmp/VOC_VDEBUG", 0, 0) == YES) # debug flag
call strcpy ("+d", dbgflag, SZ_FNAME)
else
call strcpy ("+n", dbgflag, SZ_FNAME)
######################################
# Call the VODATA task interface.
######################################
call vx_vodata (16, # argc
"-t", Memc[stype], # type constraint
"-b", Memc[bpass], # bandpass constraint
"-O", Memc[tout], # output filename (temp)
verb, # query verbosity
allflag, # query all data?
dbgflag, # debug flag
listflag, # svc_list flag
"-q", # suppress output
"-N", # numeric output name
"-R", # output format
resfile, # resources to query
objfile, sr) # objects to query
if (!quiet && (nres > 1 || IS_INDEFI(nres)) && streq(output,"STDOUT")) {
call printf("# Rows Cols File \tResource Title\n")
call printf("#\n")
}
# Clean up the output filenames. For a single resource/object we
# still end up with a name file 'foo_000_000.xml', use a more
# logical naming scheme.
if (!all) {
ndat = vod_rename (output, Memc[tout], format, Memc[extn],
nres, nobjs, quiet, count, do_samp)
}
if (!quiet && (nres > 1 || IS_INDEFI(nres)) && streq(output,"STDOUT")) {
call printf ("#\n# Data found for %d of %d resources queried.\n")
call pargi (ndat)
call pargi (nres)
}
# Clean up the temporary resource and object/position files.
if (access (resfile, 0, 0) == YES)
call delete (resfile)
if (access (objfile, 0, 0) == YES)
call delete (objfile)
end
# VOD_RENAME -- Clean up the output filenames. For a single resource/object
# we still end up with a name file 'foo_000_000.xml', use a more logical
# naming scheme.
int procedure vod_rename (output, tout, format, extn, nres, nobjs,
quiet, count, samp)
char output[ARB] #i output base name
char tout[ARB] #i temp output name
char format[ARB] #i output format
char extn[ARB] #i filename extension
int nres #i number of resources
int nobjs #i number of objects
bool quiet #i print summary?
bool count #i print result count only?
bool samp #i broadcast as SAMP message?
pointer sp, line, svc, obj, dir, new, old
int i, j, ip, sfd, nch, nfound, nrows, ncols, stat
int access(), stridx(), strldx(), getline(), open(), ctoi()
int vot_convert()
bool streq()
begin
call smark (sp)
call salloc (svc, SZ_FNAME, TY_CHAR)
call salloc (obj, SZ_FNAME, TY_CHAR)
call salloc (new, SZ_FNAME, TY_CHAR)
call salloc (old, SZ_FNAME, TY_CHAR)
call salloc (line, SZ_LINE, TY_CHAR)
call salloc (dir, SZ_PATHNAME, TY_CHAR)
nrows = 0
ncols = 0
nfound = 0
# Get the cwd.
call fpathname (".", Memc[dir], SZ_PATHNAME)
ip = stridx ('/', Memc[dir])
call strcpy (Memc[dir+ip-1], Memc[dir], SZ_PATHNAME)
call sprintf (Memc[obj], SZ_FNAME, "%s.objects")
call pargstr (output)
sfd = NULL
if (IS_INDEFI(nres)) {
# Get the number of services queried.
call sprintf (Memc[svc], SZ_FNAME, "%s.services")
call pargstr (output)
sfd = open (Memc[svc], READ_ONLY, TEXT_FILE)
nch = getline (sfd, Memc[line])
ip = 20
nch = ctoi (Memc[line], ip, nres)
nch = getline (sfd, Memc[line]) # Skip ahead
nch = getline (sfd, Memc[line])
}
# Process the output files as needed.
for (i=0; i < nres; i=i+1) {
if (IS_INDEFI(nres))
nch = getline (sfd, Memc[line])
for (j=0; j < nobjs; j=j+1) {
# Construct the vodata filename.
call sprintf (Memc[old], SZ_FNAME, "%s_%03d_%03d.xml")
call pargstr (tout)
call pargi (i)
call pargi (j)
if (streq ("STDOUT", output) || streq ("STDERR", output)) {
call strcpy (output, Memc[new], SZ_FNAME)
if (access (Memc[old], 0, 0) == YES) {
call fcopy (Memc[old], Memc[new])
call delete (Memc[old])
nfound = nfound + 1
}
} else {
if (nres == 1 && nobjs == 1) {
call sprintf (Memc[new], SZ_FNAME, "%s%s%s")
call pargstr (Memc[dir])
call pargstr (output)
call pargstr (extn)
} else if (nres == 1) {
call sprintf (Memc[new], SZ_FNAME, "%s%s_%03d%s")
call pargstr (Memc[dir])
call pargstr (output)
call pargi (j)
call pargstr (extn)
} else if (nobjs == 1) {
call sprintf (Memc[new], SZ_FNAME, "%s%s_%03d%s")
call pargstr (Memc[dir])
call pargstr (output)
call pargi (i)
call pargstr (extn)
} else {
call sprintf (Memc[new], SZ_FNAME, "%s%s_%03d_%03d%s")
call pargstr (Memc[dir])
call pargstr (output)
call pargi (i)
call pargi (j)
call pargstr (extn)
}
if (access (Memc[old], 0, 0) == YES) {
if (!quiet) {
call vod_tinfo (Memc[old], nrows, ncols)
ip = strldx ('/', Memc[new])
call eprintf (" %5d %4d %s")
call pargi (nrows)
call pargi (ncols)
call pargstr (Memc[new+ip])
if (nres > 1) {
call eprintf (" %s")
call pargstr (Memc[new+22])
} else
call eprintf ("\n")
}
if (count) {
# If ony printing a count, delete saved results.
if (access (Memc[old], 0, 0) == YES)
call delete (Memc[old])
} else {
if (access (Memc[new], 0, 0) == NO) {
if (!streq (extn, "xml")) {
stat = vot_convert (Memc[old], Memc[new],
format)
call delete (Memc[old])
} else
call frename (Memc[old], Memc[new])
}
if (samp) # broadcast the table
call vod_bcast_table (Memc[new])
}
nfound = nfound + 1
}
}
if (DEBUG) {
call eprintf ("%d/%d: %s -> %s\n")
call pargi (nres) ; call pargi (nobjs)
call pargstr (Memc[old])
call pargstr (Memc[new])
}
}
}
if (count || streq (output, "STDOUT")) {
# If ony printing a count, delete saved results.
if (access (Memc[svc], 0, 0) == YES)
call delete (Memc[svc])
if (access (Memc[obj], 0, 0) == YES)
call delete (Memc[obj])
}
if (sfd != NULL)
call close (sfd)
call sfree (sp)
return (nfound)
end
# VOD_TINFO -- Get table dimensions.
procedure vod_tinfo (tblname, nrows, ncols)
char tblname[ARB] #i table name
int nrows, ncols #o table dimensions
pointer tp, tbtopn()
int tbpsta()
begin
iferr {
tp = tbtopn (tblname, READ_ONLY, 0)
} then {
call eprintf ("Error: can't open '%s'\n")
call pargstr (tblname)
return
}
nrows = tbpsta (tp, TBL_NROWS)
ncols = tbpsta (tp, TBL_NCOLS)
call tbtclo (tp)
end
# VOD_BCAST_TABLE -- Broadcast a table name for loading.
procedure vod_bcast_table (tblname)
char tblname[ARB] #i table name
pointer sp, cwd, cmd, name
int status
begin
call smark (sp)
call salloc (cwd, SZ_PATHNAME, TY_CHAR)
call salloc (cmd, SZ_PATHNAME, TY_CHAR)
call salloc (name, SZ_PATHNAME, TY_CHAR)
# Get the current working dir
call zfgcwd (Memc[cwd], SZ_PATHNAME, status)
call strupk (Memc[cwd], Memc[cwd], SZ_PATHNAME)
# Broadcast the table
call sprintf (Memc[cmd], SZ_PATHNAME, "samp loadVOTAble file://%s\n")
call pargstr (tblname)
# FIXME -- Need to be using the real SAMP interface here.
call clcmd (Memc[cmd])
call sfree (sp)
end
# VOD_GET_FORMAT -- Convert the format parameter to the flag and file extn.
procedure vod_get_format (format, fmt, extn)
char format[ARB] #i format parameter
char fmt[ARB] #o format flag
char extn[ARB] #o output extension
int ofmt
int strdic()
begin
ofmt = strdic (format, fmt, SZ_FNAME, OUT_FMTS)
switch (ofmt) {
case FMT_ASCII:
call strcpy ("-A", fmt, SZ_FNAME)
call strcpy (".asv", extn, SZ_FNAME)
case FMT_CSV:
call strcpy ("-C", fmt, SZ_FNAME)
call strcpy (".csv", extn, SZ_FNAME)
case FMT_TSV:
call strcpy ("-T", fmt, SZ_FNAME)
call strcpy (".tsv", extn, SZ_FNAME)
case FMT_HTML:
call strcpy ("-H", fmt, SZ_FNAME)
call strcpy (".html", extn, SZ_FNAME)
case FMT_RAW:
call strcpy ("-R", fmt, SZ_FNAME)
call strcpy (".xml", extn, SZ_FNAME)
case FMT_FITS:
call strcpy ("-F", fmt, SZ_FNAME)
call strcpy (".fits", extn, SZ_FNAME)
default:
call strcpy ("-R", fmt, SZ_FNAME)
call strcpy (".xml", extn, SZ_FNAME)
}
end
# VOD_TBL_COPY -- Copy a single table to a new file. If the file exists, append
# as a new extension.
procedure vod_tbl_copy (oldfile, newfile)
char oldfile[ARB] # i: current file name
char newfile[ARB] # i: new file name
int phu_copied # set by tbfpri and ignored
pointer sp, oldname, newname
bool use_fcopy # true if we should copy the file with fcopy
bool streq()
int tbtacc()
errchk tbfpri, tbtcpy
begin
call smark (sp)
call salloc (oldname, SZ_FNAME, TY_CHAR)
call salloc (newname, SZ_FNAME, TY_CHAR)
# Check to make sure the copy is legal
use_fcopy = false
if (streq (oldfile, newfile)) {
call eprintf ("Cannot copy table to itself: %s\n")
call pargstr (oldfile)
if (tbtacc (oldfile) == YES)
use_fcopy = true
if (use_fcopy) {
call tbtext (oldfile, Memc[oldname], SZ_FNAME)
call tbtext (newfile, Memc[newname], SZ_FNAME)
iferr (call fcopy (Memc[oldname], Memc[newname])) {
call erract (EA_WARN)
}
}
} else {
# Table extensions are copied by the table
# library function tbtcpy
iferr {
call tbfpri (oldfile, newfile, phu_copied)
call tbtcpy (oldfile, newfile)
} then {
call erract (EA_WARN)
}
}
call sfree (sp)
return
end
# VOD_IMG_QUERY -- Get the query params for the named image.
procedure vod_img_query (imname, ra, dec, sr, pos, size)
char imname[ARB] #i image name
double ra, dec, sr #o RA/DEC/SR params
char pos[ARB] #o POS string
char size[ARB] #o SIZE string
double r[IM_MAXDIM], w[IM_MAXDIM], cd[2,2]
double xrot, yrot, rot, scale
pointer im, mw, ctw, co
int stat
double cx, cy, ra0, dec0
pointer immap()
int sk_decim(), mw_stati()
pointer mw_sctran()
begin
# Open the image.
iferr {
im = immap (imname, READ_ONLY, 0)
} then {
# Unable to decode image WCS
call eprintf ("Error: Cannot open image '%s'\n")
call pargstr (imname)
return
}
# Get the WCS.
iferr {
stat = sk_decim (im, "world", mw, co)
if (stat == ERR || mw == NULL) {
# Unable to decode image WCS
call eprintf ("Error: No image WCS present.\n")
return
} else if (mw != NULL) {
ctw = mw_sctran (mw, "logical", "world", 03B)
cx = IM_LEN(im,1) / 2
cy = IM_LEN(im,2) / 2
call mw_c2trand (ctw, cx, cy, ra0, dec0)
# Get the CD matrix for scale and rotation
call vod_gfterm (mw, r, w, cd, mw_stati (mw, MW_NPHYSDIM))
scale = 3600. * sqrt ((cd[1,1]**2 + cd[2,1]**2 +
cd[1,2]**2 + cd[2,2]**2) / 2.)
xrot = abs (atan2 ( cd[2,1], cd[1,1]))
yrot = abs (atan2 (-cd[1,2], cd[2,2]))
rot = (xrot + yrot) / 2.0 # NOT USED
ra = ra0
dec = dec0
sr = max (((scale * IM_LEN(im,1)) / 3600.),
(scale * IM_LEN(im,2)) / 3600.)
call sprintf (pos, SZ_FNAME, "%.6g,%.6g")
call pargd (ra0)
call pargd (dec0)
call sprintf (size, SZ_FNAME, "%.4g,%.4g")
call pargd ((scale * IM_LEN(im,1)) / 3600.)
call pargd ((scale * IM_LEN(im,2)) / 3600.)
}
} then {
# Unable to decode image WCS
call eprintf ("Error: Unable to decode WCS.\n")
}
call imunmap (im)
end
# VOD_GFTERM -- Compute the output FITS CRPIX, CRVAL, and CD arrays from the
# MWCS LTERM and WTERM. Note that the CD matrix terms are still transposed
# from the usual Fortran order.
procedure vod_gfterm (mw, crpix, crval, cd, ndim)
pointer mw #i the input mwcs pointer
double crpix[ndim] #o the output FITS CRPIX array
double crval[ndim] #o the output FITS CRVAL array
double cd[ndim,ndim] #o the output FITS CD matrix
int ndim #i the dimensionality of the wcs
pointer sp, r, wcd, ltv, ltm, iltm
int i
errchk mw_gwtermd, mw_gltermd
begin
call smark (sp)
call salloc (r, ndim, TY_DOUBLE)
call salloc (wcd, ndim * ndim, TY_DOUBLE)
call salloc (ltv, ndim, TY_DOUBLE)
call salloc (ltm, ndim * ndim, TY_DOUBLE)
call salloc (iltm, ndim * ndim, TY_DOUBLE)
iferr {
call mw_gwtermd (mw, Memd[r], crval, Memd[wcd], ndim)
call mw_gltermd (mw, Memd[ltm], Memd[ltv], ndim)
call mwvmuld (Memd[ltm], Memd[r], crpix, ndim)
call aaddd (crpix, Memd[ltv], crpix, ndim)
call mwinvertd (Memd[ltm], Memd[iltm], ndim)
call mwmmuld (Memd[wcd], Memd[iltm], cd, ndim)
} then {
# Set up a default value.
call aclrd (cd, ndim*ndim)
for (i=1; i <= ndim; i=i+1) {
crpix[i] = 1.0d0
crval[i] = 1.0d0
cd[i,i] = 1.0d0
}
}
call sfree (sp)
end
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