Repatch (from linux) of OSX IRAF

18 files changed, 445 insertions, 0 deletions

diff --git a/vendor/voclient/testscripts/help.sh b/vendor/voclient/testscripts/help.sh
new file mode 100644
index 00000000..6b70d04e
--- /dev/null
+++ b/vendor/voclient/testscripts/help.sh
@@ -0,0 +1,37 @@
+voiminfo --help
+vosamp --help
+votcnv --help
+votget --help
+votinfo --help
+votopic --help
+votpos --help
+votsort --help
+votstat --help
+voatlas --help
+vocatalog --help
+vodata --help
+voimage --help
+voregistry --help
+vosloanspec --help
+vosesame --help
+vosession --help
+vospectra --help
+voiminfo -h
+vosamp -h
+votcnv -h
+votget -h
+votinfo -h
+votopic -h
+votpos -h
+votsort -h
+votstat -h
+voatlas -h
+vocatalog -h
+vodata -h
+voimage -h
+voregistry -h
+vosesame -h
+vosession -h
+vosloanspec -h
+vospectra -h
+
diff --git a/vendor/voclient/testscripts/readme.txt b/vendor/voclient/testscripts/readme.txt
new file mode 100644
index 00000000..6ee976a3
--- /dev/null
+++ b/vendor/voclient/testscripts/readme.txt
@@ -0,0 +1,11 @@
+Various test scripts for runing tests on command line voclient tools.
+
+do
+sh -x test.sh
+
+first.
+The other scripts a pretty self explanatory. They follow the pattern
+
+sh -x vo*.sh
+
+There are all pretty mundane but are useful for a sanity check.
diff --git a/vendor/voclient/testscripts/test.sh b/vendor/voclient/testscripts/test.sh
new file mode 100644
index 00000000..5c984e83
--- /dev/null
+++ b/vendor/voclient/testscripts/test.sh
@@ -0,0 +1,28 @@
+cp ../test-data/* .
+#voiminfo --test
+#vosamp --test
+#votcnv --test ned.xml
+#votget --test sia.xml
+#votinfo --test
+#votopic --test
+#votpos --test 2mass.xml
+#votsort --test sia.xml
+#votstat --test zz.xml
+voiminfo -%
+vosamp -%
+votcnv -% ned.xml
+votget -% sia.xml
+votinfo -%
+votopic -%
+votpos -% 2mass.xml
+votsort -% sia.xml
+votstat -% zz.xml
+voatas -%
+vocatalog -%
+vodata -%
+voimage -%
+voregistry -% -c -t image
+vosesame -%
+#vosession -%
+vosloanspec -%
+vospectra -%
diff --git a/vendor/voclient/testscripts/voatlas.sh b/vendor/voclient/testscripts/voatlas.sh
new file mode 100644
index 00000000..484d9181
--- /dev/null
+++ b/vendor/voclient/testscripts/voatlas.sh
@@ -0,0 +1,18 @@
+#vosamp quit
+vosamp status
+ps -u wyoung | grep Aladin > isrunning.Aladin
+count=`wc -l isrunning.Aladin | awk '{print $1}'`
+if [ $count -lt 2 ]; then
+	open /Applications/Aladin.app
+fi
+rm isrunning.Aladin
+ps -u wyoung | grep TOPCAT > isrunning.TOPCAT
+count=`wc -l isrunning.TOPCAT | awk '{print $1}'`
+if [ $count -lt 2 ]; then
+	open /Applications/TOPCAT.app
+fi
+rm isrunning.TOPCAT
+sleep 10
+echo
+voatlas --samp m13
+voatlas -R 12 -D 30 -s 1d
diff --git a/vendor/voclient/testscripts/vocatalog.sh b/vendor/voclient/testscripts/vocatalog.sh
new file mode 100644
index 00000000..80d7cf58
--- /dev/null
+++ b/vendor/voclient/testscripts/vocatalog.sh
@@ -0,0 +1,13 @@
+vocatalog -v -A -a gsc2.3 m31,m51,m93 
+vocatalog -v -C -a gsc2.3 m31,m51,m93 
+vocatalog -v -H -a gsc2.3 m31,m51,m93 
+vocatalog -v -K -a gsc2.3 m31,m51,m93 
+vocatalog -v -R -a gsc2.3 m31,m51,m93 
+vocatalog -v -V -a gsc2.3 m31,m51,m93 
+vocatalog -v -T -a gsc2.3 m31,m51,m93 
+vocatalog -vv -e -a gsc2.3 m42
+vocatalog -vv -e=pos -a gsc2.3 m42
+vocatalog -vv -e=urls -a gsc2.3 m42
+vocatalog -vv -eh -a gsc2.3 m42
+vocatalog -vv -ek -a gsc2.3 m42
+vocatalog -vv -eK -a gsc2.3 m42
diff --git a/vendor/voclient/testscripts/vodata.sh b/vendor/voclient/testscripts/vodata.sh
new file mode 100644
index 00000000..40e3ba51
--- /dev/null
+++ b/vendor/voclient/testscripts/vodata.sh
@@ -0,0 +1,13 @@
+vodata -v -A -a gsc2.3 m31,m51,m93 
+vodata -v -C -a gsc2.3 m31,m51,m93 
+vodata -v -H -a gsc2.3 m31,m51,m93 
+vodata -v -K -a gsc2.3 m31,m51,m93 
+vodata -v -R -a gsc2.3 m31,m51,m93 
+vodata -v -V -a gsc2.3 m31,m51,m93 
+vodata -v -T -a gsc2.3 m31,m51,m93 
+vodata -vv -e -a gsc2.3 m42
+vodata -vv -e=pos -a gsc2.3 m42
+vodata -vv -e=urls -a gsc2.3 m42
+vodata -vv -eh -a gsc2.3 m42
+vodata -vv -ek -a gsc2.3 m42
+vodata -vv -eK -a gsc2.3 m42
diff --git a/vendor/voclient/testscripts/voimage.sh b/vendor/voclient/testscripts/voimage.sh
new file mode 100644
index 00000000..a7b96dc2
--- /dev/null
+++ b/vendor/voclient/testscripts/voimage.sh
@@ -0,0 +1,2 @@
+voimage -v  any m31,m51,m93 
+voimage -vv any m42
diff --git a/vendor/voclient/testscripts/voiminfo.sh b/vendor/voclient/testscripts/voiminfo.sh
new file mode 100644
index 00000000..992f4f81
--- /dev/null
+++ b/vendor/voclient/testscripts/voiminfo.sh
@@ -0,0 +1,42 @@
+for file in  dpix.fits mef.fits sif.fits ypix.fits ypix2.fits ypix3.fits
+do
+	echo
+	echo ---- $file ----
+	echo
+	voiminfo -a $file
+	voiminfo -i $file
+	voiminfo -b $file
+	voiminfo -c $file
+	voiminfo -n $file
+	voiminfo -s $file
+	voiminfo --all $file
+	voiminfo --info $file
+	voiminfo --box $file
+	voiminfo --corners $file
+	voiminfo --naxes $file
+	voiminfo --sex $file
+	echo
+	echo ---------------
+	echo
+done
+for file in  dpix.fits mef.fits sif.fits ypix.fits ypix2.fits ypix3.fits
+do
+	echo
+	echo ---- $file ----
+	echo
+	voiminfo -a http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo -i http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo -b http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo -c http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo -n http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo -s http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo --all http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo --info http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo --box http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo --corners http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo --naxes http://www.nrao.edu/~wyoung/test-data/$file
+	voiminfo --sex http://www.nrao.edu/~wyoung/test-data/$file
+	echo
+	echo ---------------
+	echo
+done
diff --git a/vendor/voclient/testscripts/voregistry.sh b/vendor/voclient/testscripts/voregistry.sh
new file mode 100644
index 00000000..32079311
--- /dev/null
+++ b/vendor/voclient/testscripts/voregistry.sh
@@ -0,0 +1,21 @@
+for resource in catalog image spectra table
+do
+	# voregistry --resolve --verbose --type $resource
+	voregistry -rv -t $resource > /tmp/blah
+	for band in Radio Optical GR Millimeter UV IR xr
+	do
+	# voregistry --resolve --verbose --bandpass $band --type $resource
+	   voregistry -rv -b $band -t $resource > /tmp/blah
+	   voregistry -rv -c -b $band -t $resource
+	done
+	voregistry -rvI -t $resource
+	voregistry -rvR -t $resource
+	voregistry -rvS -t $resource
+	voregistry -rvT -t $resource
+	voregistry -rvd -t $resource
+	voregistry -rv -s "outflow" -t $resource
+	#for flag in Title SerivceURL Subject Creator CoverageTemporal Version ShortName ReferenceURL ResourceType Publisher Waveband Identifier Description Type CoverageSpatial ContentLevel
+	#do
+	# voregistry --resolve --verbose --fields $flag --type $resource
+	#done
+done
diff --git a/vendor/voclient/testscripts/vosamp.sh b/vendor/voclient/testscripts/vosamp.sh
new file mode 100644
index 00000000..ae5255c0
--- /dev/null
+++ b/vendor/voclient/testscripts/vosamp.sh
@@ -0,0 +1,30 @@
+#vosamp quit
+vosamp status
+ps -u wyoung | grep Aladin > isrunning.Aladin
+count=`wc -l isrunning.Aladin | awk '{print $1}'`
+if [ $count -lt 2 ]; then
+	open /Applications/Aladin.app
+fi
+rm isrunning.Aladin
+ps -u wyoung | grep TOPCAT > isrunning.TOPCAT
+count=`wc -l isrunning.TOPCAT | awk '{print $1}'`
+if [ $count -lt 2 ]; then
+	open /Applications/TOPCAT.app
+fi
+rm isrunning.TOPCAT
+sleep 10
+echo
+vosamp status
+vosamp list
+vosamp access topcat
+vosamp access Aladin
+vosamp load dpix.fits
+vosamp -t Aladin loadImage ypix2.fits
+vosamp load 2mass.xml
+vosamp load http://www.nrao.edu/~wyoung/test-data/ypix.fits
+vosamp loadImage http://www.nrao.edu/~wyoung/test-data/ypix.fits
+vosamp showRow 5
+vosamp -t Aladin showRow 13
+vosamp -t Aladin selectRows 5-9
+vosamp -t Aladin showRow 17
+#vosamp quit
diff --git a/vendor/voclient/testscripts/vosesame.sh b/vendor/voclient/testscripts/vosesame.sh
new file mode 100644
index 00000000..9582d79d
--- /dev/null
+++ b/vendor/voclient/testscripts/vosesame.sh
@@ -0,0 +1,36 @@
+for obj in m1 m31 ngc4525 
+do
+	vosesame -a $obj
+        vosesame -d $obj
+        vosesame -e $obj
+        vosesame -n $obj
+        vosesame -s $obj
+        vosesame -t $obj
+	vosesame -fa $obj
+        vosesame -fd $obj
+        vosesame -fe $obj
+        vosesame -fs $obj
+        vosesame -ft $obj
+	vosesame -Afa $obj
+        vosesame -Cfd $obj
+        vosesame -Hfe $obj
+        vosesame -Tfs $obj
+        vosesame -Tfs -o sillyfile.txt $obj
+	vosesame --all $obj
+        vosesame --decimal $obj
+        vosesame --errors $obj
+        vosesame --name $obj
+        vosesame --sex $obj
+        vosesame --type $obj
+	vosesame --force --all $obj
+        vosesame --force --decimal $obj
+        vosesame --force --error $obj
+        vosesame --force --name $obj
+        vosesame --force --sex $obj
+        vosesame --force --type $obj
+	vosesame --ascii --force --all $obj
+        vosesame --comma --force --decimal $obj
+        vosesame --header --force --errors $obj
+        vosesame --tab --force --sex $obj
+        vosesame --tab --force --sex --output=sillyfile.txt $obj
+done
diff --git a/vendor/voclient/testscripts/votcnv.sh b/vendor/voclient/testscripts/votcnv.sh
new file mode 100644
index 00000000..adc66ec6
--- /dev/null
+++ b/vendor/voclient/testscripts/votcnv.sh
@@ -0,0 +1,37 @@
+for file in ned.xml http://www.nrao.edu/~wyoung/test-data/ned.xml
+do
+	echo 
+	echo ---- $file ----
+	votcnv $file >convert0.txt
+	votcnv -f vot $file >convert1.txt
+	votcnv -f asv $file >convert2.txt
+	votcnv -f bsv $file >convert3.txt
+	votcnv -f csv $file >convert4.txt
+	votcnv -f tsv $file >convert5.txt
+	votcnv -f html $file >convert6.txt
+	votcnv -f shtml $file >convert7.txt
+	votcnv -f fits $file >convert8.txt
+	votcnv -f ascii $file >convert9.txt
+	votcnv -f xml $file >convert10.txt
+	votcnv -f raw $file >convert11.txt
+	votcnv -i 3 $file >convert12.txt
+	votcnv -f asv -n $file >convert13.txt
+	votcnv -f bsv -o convert14.txt -n $file 
+	votcnv --fmt vot $file >convert1.txt
+	votcnv --fmt asv $file >convert2.txt
+	votcnv --fmt bsv $file >convert3.txt
+	votcnv --fmt csv $file >convert4.txt
+	votcnv --fmt tsv $file >convert5.txt
+	votcnv --fmt html $file >convert6.txt
+	votcnv --fmt shtml $file >convert7.txt
+	votcnv --fmt fits $file >convert8.txt
+	votcnv --fmt ascii $file >convert9.txt
+	votcnv --fmt xml $file >convert10.txt
+	votcnv --fmt raw $file >convert11.txt
+	votcnv --indent 3 $file >convert12.txt
+	votcnv --fmt asv --noheader $file >convert13.txt
+	votcnv --fmt bsv --output convert14.txt -n $file 
+	echo 
+	echo --------------
+	echo 
+done
diff --git a/vendor/voclient/testscripts/votget.sh b/vendor/voclient/testscripts/votget.sh
new file mode 100644
index 00000000..3bef6f3c
--- /dev/null
+++ b/vendor/voclient/testscripts/votget.sh
@@ -0,0 +1,31 @@
+for file in sia.xml http://www.nrao.edu/~wyoung/test-data/sia.xml
+do
+	echo 
+	echo ---- $file ----
+	votget $file
+	votget -b stuff  $file
+	votget -e one $file
+	votget -s $file
+	votget -u VOX:Image_accessReference $file
+	votget -v $file
+	votget -x $file
+	rm -rf testresults
+	votget -D testresults $file
+	votget -N 3 $file
+	votget -d $file
+	votget -o download.txt $file
+	votget --base stuff  $file
+	votget --extn one $file
+	votget --sum $file
+	votget --ucd VOX:Image_accessReference $file
+	votget --verbose $file
+	votget --extract $file
+	rm -rf testresults
+	votget --download testresults $file
+	votget --num 3 $file
+	votget --debug $file
+	votget --output download.txt $file
+	echo 
+	echo --------------
+	echo 
+done
diff --git a/vendor/voclient/testscripts/votinfo.sh b/vendor/voclient/testscripts/votinfo.sh
new file mode 100644
index 00000000..32a05909
--- /dev/null
+++ b/vendor/voclient/testscripts/votinfo.sh
@@ -0,0 +1,39 @@
+for file in *.xml http://www.nrao.edu/~wyoung/test-data/ned.xml
+do
+	echo
+	echo ---- $file ----
+	echo
+	votinfo $file
+	votinfo -w -b $file
+	votinfo -w -d $file
+	votinfo -w -i $file
+	votinfo -w -n param $file
+	votinfo -w -n info $file
+	votinfo -w -n rows $file
+	votinfo -w -n cols $file
+	votinfo -w -n resources $file
+	votinfo -w -p $file
+	votinfo -w -s $file
+	votinfo -w -v $file
+	echo
+	echo --------------
+	echo
+	echo
+	echo ---- $file ----
+	echo
+	votinfo $file
+	votinfo --warn --brief $file
+	votinfo --warn --description $file
+	votinfo --warn --info $file
+	votinfo --warn --numberOf=param $file
+	votinfo --warn --numberOf=info $file
+	votinfo --warn --numberOf=rows $file
+	votinfo --warn --numberOf=cols $file
+	votinfo --warn --numberOf=resources $file
+	votinfo --warn --param $file
+	votinfo --warn --size $file
+	votinfo --warn --verbose $file
+	echo
+	echo --------------
+	echo
+done
diff --git a/vendor/voclient/testscripts/votopic.sh b/vendor/voclient/testscripts/votopic.sh
new file mode 100644
index 00000000..36d70101
--- /dev/null
+++ b/vendor/voclient/testscripts/votopic.sh
@@ -0,0 +1,9 @@
+for file in m31
+do
+	echo 
+	echo ---- $file ----
+	votopic -t catalog radio $file 0.10
+	echo 
+	echo --------------
+	echo 
+done
diff --git a/vendor/voclient/testscripts/votpos.sh b/vendor/voclient/testscripts/votpos.sh
new file mode 100644
index 00000000..eff90b07
--- /dev/null
+++ b/vendor/voclient/testscripts/votpos.sh
@@ -0,0 +1,22 @@
+votpos 2mass.xml
+votpos 2mass.xml
+votpos ds9.xml
+votpos ned.xml
+votpos sia.xml
+votpos sort.xml
+votpos zz.xml
+votpos -n 2mass.xml
+votpos -n ds9.xml
+votpos -n ned.xml
+votpos -n sia.xml
+votpos -n sort.xml
+votpos -n zz.xml
+votpos http://www.nrao.edu/~wyoung/test-data/ds9.xml
+votpos http://www.nrao.edu/~wyoung/test-data/ned.xml
+votpos http://www.nrao.edu/~wyoung/test-data/sia.xml
+votpos http://www.nrao.edu/~wyoung/test-data/sort.xml
+votpos -n http://www.nrao.edu/~wyoung/test-data/2mass.xml
+votpos -n http://www.nrao.edu/~wyoung/test-data/ds9.xml
+votpos -n http://www.nrao.edu/~wyoung/test-data/ned.xml
+votpos -n http://www.nrao.edu/~wyoung/test-data/sia.xml
+votpos -n http://www.nrao.edu/~wyoung/test-data/sort.xml
diff --git a/vendor/voclient/testscripts/votsort.sh b/vendor/voclient/testscripts/votsort.sh
new file mode 100644
index 00000000..5ebeebcb
--- /dev/null
+++ b/vendor/voclient/testscripts/votsort.sh
@@ -0,0 +1,31 @@
+for file in ned.xml http://www.nrao.edu/~wyoung/test-data/ned.xml
+do
+	echo 
+	echo ---- $file ----
+	echo 
+	votsort $file >sort1.txt
+	votsort -c 3 $file > sort2.txt
+	votsort -d $file
+	votsort -f vot $file
+	votsort -f asv $file
+	votsort -f bsv $file
+	votsort -f csv $file
+	votsort -f tsv $file
+	votsort -f html $file
+	votsort -f shtml $file
+	votsort -f fits $file > sort.fits
+	votsort -f ascii $file
+	votsort -f xml $file
+	votsort -f raw $file
+	votsort -s $file
+	votsort -t 10 $file
+	votsort -i 3 $file
+	votsort -n -f csv $file
+	votsort -N "RA(deg)" $file > sort3.txt
+	votsort -I main_col4 $file > sort4.txt
+	votsort -U src.redshift $file >sort5.tx
+
+	echo 
+	echo --------------
+	echo 
+done
diff --git a/vendor/voclient/testscripts/votstat.sh b/vendor/voclient/testscripts/votstat.sh
new file mode 100644
index 00000000..523551d9
--- /dev/null
+++ b/vendor/voclient/testscripts/votstat.sh
@@ -0,0 +1,25 @@
+votstat -a 2mass.xml
+votstat -a ds9.xml
+votstat -a ned.xml
+votstat -a sia.xml
+votstat -a sort.xml
+votstat -a zz.xml
+votstat  2mass.xml
+votstat  ds9.xml
+votstat  ned.xml
+votstat  sia.xml
+votstat  sort.xml
+votstat  zz.xml
+votstat  http://www.nrao.edu/~wyoung/test-data/2mass.xml
+votstat  http://www.nrao.edu/~wyoung/test-data/ds9.xml
+votstat  http://www.nrao.edu/~wyoung/test-data/ned.xml
+votstat  http://www.nrao.edu/~wyoung/test-data/sia.xml
+votstat  http://www.nrao.edu/~wyoung/test-data/sort.xml
+votstat  http://www.nrao.edu/~wyoung/test-data/zz.xml
+votstat  -a http://www.nrao.edu/~wyoung/test-data/2mass.xml
+votstat  -a http://www.nrao.edu/~wyoung/test-data/ds9.xml
+votstat  -a http://www.nrao.edu/~wyoung/test-data/ned.xml
+votstat  -a http://www.nrao.edu/~wyoung/test-data/sia.xml
+votstat  -a http://www.nrao.edu/~wyoung/test-data/sort.xml
+votstat  -a http://www.nrao.edu/~wyoung/test-data/zz.xml
+