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|
Notes on the port of IRAF V2.3+ to the Alliant FX vector workstation,
beginning 25 August 1986 (dct). This is a continuation of a port started
by Dennis Crabtree on 12 August, with some of the problems found then being
fixed before the bootstrap or sysgen in this port.
---------------------------------------------------------------------------
Read tape onto VAX 780 using IRAF `reblock' task. Worked great, except
that I allocated the drive in vms before running IRAF: this caused
the IRAF allocate to fail, causing a read error on the first
attempt to run reblock (confusing). (8/25)
Copied archive to the Alliant via the ethernet which runs the Excelan
network software. The first attempt to unpack the archive on the
Alliant failed with a checksum error message from tar; this turned
out to be due to not specifying a binary transfer in TELNET before
copying the file (a newline was being inserted after every 512
bytes). After retransmission to fix this, unpacked everything
successfully at /u2/iraf. (8/25)
Notes -
There is a bug in the Excelan network software that causes it to
hang up the terminal if too many characters are transmitted,
forcing one to login on another terminal and STOP the process.
The Alliant died on a kernel panic (mfree failure) during one
of these network crashes and had to be rebooted. Another time
it hung up in a hard loop when tyring to delete the large archive
file (bad disk block?) and had to be rebooted.
DAO uses Plessey PT-100G graphics terminals. These have an awful
keyboard with keybounce and keylost problems. A screen redraw takes
3 seconds. The screen color is orange - not as bright as amber,
green, or white. Other than that they seem fine - have not tried out
the graphics yet. (8/25)
Tried the graphics finally, on VMS/IRAF. The graphics resolution is
good (480x1000?) and vector drawing is fast. Hardware cursor setting
is better than on the vt640 (shift and ctrl as used as accelerators,
and 45 degree motions are supported), but unfortunately there is no
software write cursor function, so the HJKL and other cursor write
features (as in in a zoom) do not work. The alpha and graphics
memories are separate and can be displayed together, as on the vt640.
The main problems of this terminal are the keyboard, slow screen
redraw, and lack of a software write cursor function (but it is
better than a vt240!). (8/30)
local/.login
Set up the .login for the new system. (8/25)
Notes -
Tried using the vms COPY to copy the tar file to disk, to see if
that would work. COPY produced a variable length, 10240 byte max
record length, carriage control etc. file as output, i.e., a text
file. This explains why the initial attempt to read the tar tape
failed. Probably the best way to distribute tar archives to VMS
sites is by making a BACKUP tape of a disk tar file. This avoids
this type of confusion, and also gains access to the error recovery
provided by BACKUP. (8/26)
/usr/include/iraf.h
/usr/bin/cl,mkiraf,etc.
Changed to point to /u2/. (8/26)
unix/hlib/[dir]mach.f
Commented out pdp-11 entries and uncommented IEEE entries. In two of
the files, commented out the call to ILIBER; I don't think we want
that (should be fixed on Lyra). (8/26)
unix/hlib/iraf.h
unix/hlib/mach.h
Changed the values of epsilonr, epsilond to the IEEE values. Set the
byte swap flags to NO. (8/26)
unix/hlib/iraf.h
Set defines for and,or,xor to iand,ior,ieor. Not is not. (8/26)
unix/hlib/mkiraf.csh
Changed iraf root directory to /u2/iraf. (8/26)
unix/hlib/mkpkg.inc
Set siteid to `dao', turned off ncar, calcomp kernels. XC flags will
probably also have to be changed, but leave that for later. (8/26)
unix/as/zsvjmp.s
unix/hlib/config.h
unix/hlib/libc/spp.h
Wrote the ZSVJMP/ZDOJMP for the Alliant (as$zsvjmp.s), and set the
jump buffer size parameters in config.h and spp.h. The current routine
saves the exception mask and all the floating point and vector
registers as well as the 68000 registers, which is more than is really
necessary. (8/26)
unix/os/zgtime.c
unix/os/gmttolst.c
unix/boot/bootlib/ostime.c
From looking at Dennis's notes I see that time.h is in <sys/time.h>
rather than <time.h> on the Alliant. In fact it is referenced both
ways in the VAX/UNIX kernel, so I changed all references to
<sys/time.h>, don't know what the official answer to this one is.
Removed the link (added by Dennis) in /usr/include. (8/26)
unix/hlib/libc/iraf.h
unix/os/zxwhen.c
In iraf.h, added a #define ALLIANT for use in HSI code. In zxwhen,
replaced the array of vax exceptions by an #ifdef-ed array of
alliant specific hardware exceptions (hwx_). (8/26)
unix/os/zxwhen.c
The Alliant C compiler produced a syntax error for the declaration
for the pointer to function `vector'. Presumably this was due to
vector being a reserved keyword to the Alliant C compiler; changed
the name to `vvector' and it compiled. (8/26)
unix/boot/spp/xc.c
Replaced f77 by the Alliant task `fortran' (the Alliant Fortran
compiler) to compile Fortran files. Modified to use cc rather
than f77 to compile all other files. Modified to add the .f
files produced from .x sources to the Fortran file list, rather
than the general source file list input to the C compiler (formerly
these files were processed by f77, which can compile anything).
Parameterized the names of the fortran compiler, the C compiler,
and the linker. Deleted the "-u" flag, which is not supported on
the Alliant. Changed the Fortran library name from `-lF77' to
`-lfortran'. (8/26)
In the long run, XC needs to be rewritten to be more portable,
like mkpkg. This is still the original unix compiler, which was
never intended to be ported.
unix/boot/spp/rpp/ratlibf/Makefile
unix/boot/spp/rpp/rppfor/Makefile
Modified to call `fortran' rather than `f77'. (8/26)
---------------------------
(first attempt to bootstrap)
unix/os/zfiomt.c
C compiler error. The declaration of the automatic array in
the skip record forward function, i.e.,
char buf[32768];
caused the fatal error `too many local variables' from the
C compiler. I reduced the size to [28800]. Recall that this
used to be a small buffer, but I had to make it larger than the
maximum tape block size to avoid i/o errors on the SUNs. Use
of malloc is undesirable since skip record forward might be
called many times in a loop. In any case, this is an indication
that the Alliant C compiler has limited symbol table storage and
may have problems with large programs or modules. (8/27)
Note on Alliant Fortran compiler (task `fortran').
The compiler cannot handle a "-cO" flag on the command line.
The "-O" must be given as a separate flag. (8/27)
unix/boot/spp/rpp/ratlibf/dsfree.f
On line 20, the hollerith string contained a tab instead of a space,
causing the line length to exceed 20 characters. (8/27)
unix/boot/bootlib/mkpkg.csh
The executable nature of this .csh is a nusiance; a different way
should be found to do this. (8/27)
unix/hlib/mkpkg.inc
Changed the default compile flags to "-c -Ovg -AS -OM" for the Alliant.
(8/27)
---------------------------
(bootstrap completed)
unix/hlib/alloc.e
Changed owner to root. (8/27)
sys/gio/gki/gkigca.x
The min() instrinsic function was being called with operands of mixed
type, i.e., int and short. Restructured so that both operands were of
type int. (8/27)
sys/gio/gki/gkigca.x
In this case, the Alliant compiler found a real bug in a module.
The warning message `subscript out of range' was being produced
because Mems[] was being referenced with a compile time constant
subscript, caused by omission of the pointer variable from the
expression. The bug was harmless, however, since the affected
argument (the device name string) was not being used by the called
procedure (close workstation). (8/27)
sys/vops/lz/mkpkg
Added $checkout libvops.a, etc., to the file header. (8/27)
sys/vops/ak/*.x
sys/vops/lz/*.x
unix/boot/generic/generic.c
The Alliant fortran compiler complains about use of (0,0) as a
complex constant. This string is generated by the generic
preprocessor when the sequence 0$f is encountered (actually,
any sequence NN$f is permitted). Modified the generic preprocessor
to turn NN$f into (NN.0,NN.0) for the complex datatype, and
deleted all the complex files (and associated integer files) in ak
and lz containing the string (0,0). These will be automatically
regenerated by the preprocessor in the sysgen provided the integer
family member is not found - the mkpkg only checks the date (and
existence) of the integer file. (8/27)
pkg/system/help/t_lroff.x
Added an extern declaration for `getline', since it is passed by name
to the lroff function. (8/27)
pkg/cl/task.h
In the #define next_task, deleted the (unsigned) coercion. This should
not be necessary as a pointer is already an unsigned quantity, and the
Alliant C compiler would fail with the message
`expression causes compiler loop: try simplifying'
when trying to compile the file (although the same macro was used in
lots of other places without problems - maybe it was causing parser
stack overflow in the problem cases, due to a complex context). (8/27)
unix/hlib/mkpkg.inc
sys/vops/mkpkg
As an experiment, added a new environment variable XVFLAGS to
mkpkg.inc; this is used when compiling vectorized code to get
whatever compiler options are desirable for such code. Added
a $set to the vops mkpkg to redefine XFLAGS as XVFLAGS so that
the vops package will be compiled for vectorization. At present,
the value of XVFLAGS is the same as XFLAGS, i.e., vectorization
is permitted in both cases, except that the vectorization warning
messages are not turned off by the XVFLAGS. (8/27)
---------------------------
(started the first full system sysgen)
sys/gio/gki/gkiopen.x
sys/gio/gki/gkititle.x
More `subscript out of bounds' errors, caused by omission of the
pointer `gki' from gki instruction field references. (8/27)
sys/fio/osfnlock.x
The procedure osfn_initlock was declared as an integer function but
the return value was never set, causing the fortran compiler to
complain `FUNCTION return value is not defined in this program unit'.
It turns out that the procedure is called as a subroutine everywhere,
so evidently the function declaration was not intended. Changed it
to a subroutine. So far, the Alliant fortran compiler is finding
more bugs in IRAF than IRAF is finding bugs in the compiler, a pleasant
turn of affairs. (8/27)
sys/vops/amap.gx
Broke the min/max expression in the do loop up into two statements
to defeat a compiler warning message for case short; an integer
expression was being used as one of the min/max operands for case
short. (8/27)
unix/boot/generic/tok.l
The external string variable xtype_string[] was declared as (char *)
rather than (char []) in tok.l, causing a runtime bus error on the
Alliant. This construct works on the VAX because the linker is smart
enough to figure out what is going on, but clearly the construct is
not portable and should be avoided. Probably it is always safe to
use (char *) in argument lists since a pointer value is always pushed
on the stack, but in extern declarations the array notatio must be
used. (8/27)
sys/osb/mkpkg
sys/osb/achtb.gc
sys/osb/achtu.gc
sys/osb/achtzb.gc
sys/osb/achtzu.gc
A warning message from the C compiler led to the disovery of some
old complex ACHT procedures in OSB. There was a bug in these files
which had been fixed in the source .gc files, but type X had been
removed from the call to generic in the mkpkg, hence the complex
files were never regenerated. It appears that type complex was dropped
at some point from the mkpkg, but the complex files were never
deleted. The other file are more permissive with type coercion,
hence the problem was never discovered. I restored type complex to
the mkpkg and added a complex case (requires special processing) to
each of the .gc files. (8/27)
sys/gio/ncarutil/sysint/ishift.x
This file contains source for two procedures IAND and IOR. This would
not compile since the Fortran compiler already has intrinsic functions
with the same names; commented the offending procedures out as a
workaround. (8/27)
sys/ki/irafks.x
The procedure `kserver' was declared as a function but the return
value was never set, and the function was being called as a
subroutine. Changed to a subroutine. (8/27)
math/iminterp/arider.x
This file contained the three procedures ii_pcpoly3, ii_pcpoly5,
and ii_pcspline3. These were all declared as functions had no
return values and were always called as subroutines, hence I changed
them to subroutines. Also, the same external names were used with
a different argument list in the file `mrider.x', leading to a very
serious library conflict - surprised it has not caused noticeable
runtime problems to date. As a temporary solution, I changed the
names to ia_* in the file arider.x to avoid this library conflict.
(8/27)
pkg/xtools/icfit/icgdelete.gx
pkg/xtools/icfit/icgundelete.gx
pkg/onedspec/identify/icfit/icgdelete.gx
pkg/onedspec/identify/icfit/icgundelete.gx
Each file contained two procedures which were declared as functions
but which did not return function values and which were called as
subroutines, hence I changed them to subroutines. (8/27)
pkg/images/imdebug/immake.x
Subroutine immake2 declared as a function. (8/27)
pkg/images/tv/display/iiswnd.x
Contained constructs such as `max (0, lut[i])', where `lut' is a short
integer array. This caused a min/max type mismatch error. Also, a
statement had a nonfunctional C like ; at the end. (8/27)
pkg/images/tv/cv/iism70/iishisto.x
Same problem, short integer variable `offset'. (8/27)
pkg/images/geometry/blkav.gx
Main procedure blkav$t declared as a function but used as a subroutine
everywhere. (8/27)
pkg/plot/gkiextract.x
In gke_make_index, `nchars_max = min...', contained an integer constant
and a short integer array element, causing a min/max argument type
mismatch. (8/27)
noao/onedspec/t_dispcor.x
Procedure dcorrect declared as a function is really a subroutine.
Also, it has a ridiculously large number of arguments. (8/27)
---------------------------
(All compile time bugs found in this pass fixed. Stripped all non-HSI
(binaries and started another full sysgen to run overnight).
kernel problems
When I came in in the morning the sysgen had completed successfully,
but the machine seemed rather sluggish. Trying to work, I immediately
found that processes which used to run would hang up on a pseudo-run
state, completely uninterruptable, sometimes unstoppable, unkillable,
and so on. Clearly a problem with the unix kernel, so I rebooted and
the symptoms went away. Most likely this was a bug in the Alliant
unix kernel, which is common with new unix ports. (8/28)
math/interp/arider.x [OBSOLETE]
Missed one: the three procedures iidr_poly[35] and iidr_spline3 were
declared as functions but were really subroutines. (8/28)
pkg/images/tv/cv/iism70/iisrange.x
Lots of problems mixing int and short in calls to AND, OR. (8/28)
pkg/images/tv/cv/iism70/zsnap.x
This module caused the fortran compiler to core dump with an internal
error; it was trying to resolve mixed int/short operands in expressions
and couldn't handle this code, evidently. (I feel much the same way
trying to read it.)
Deleted `int min(), max()' intrinsic function declarations. Added an
itemp temporary to fix a couple min/max statements which mixed int
and short operands. (8/28)
pkg/images/tv/cv/iism70/iishisto.x
Lots and lots of compile time problems with short variables - took
several iterations to find them all. (8/28)
pkg/images/imarith/imsum.x
In module MXMNSS, the Fortran compiler coredumps when run with
global optimization (-Og). Returns `error code 138': examination
of the corefile for `fortran1' (the first pass I presume) with adb
gives the reason as `bus-error page violation'. Saved the offending
segment of code in local$bugs for a bug report to Alliant, and compiled
the routine without optimization. (8/28)
noao/mtlocal/cyber/cy_rbits.x
This file also causes the Fortran compiler to coredump and return
error code 138 - bus error page violation. Generated the minimum
Fortran module that would demonstrate the bug and installed it in
local$bugs. Hand compiled routine without optimization. (8/28)
noao/mtlocal/cyber/cyber.h, *.x
The data structure for this package included a field named POINTER.
This is a reserved keyword, and is converted by the preprocessor
into `int', eventually causing a compile time error on the Alliant
(and a memory overwrite problem on the VAX). Aside from being a
reserved keyword, POINTER is not a very illuminating name for a
field of a structure: pointer to what? After a little investigation,
changed the name to COEFF, since it appears that the field contains
a pointer to some sort of coefficient array. (8/28)
---------------------------
All compile time problems have now been dealt with and all executables linked
and installed in bin. I tried running a couple of the executables, and
incredibly, they ran without apparent error on the first attempt! Of course,
that is too good to be true, the next step is runtime testing of the system.
dev/graphcap
dev/termcap
Installed the local DAO additions to termcap and graphcap. Rather
than have a modified version of the vt640 entry for DAO, changed the
name of the new logical device to vt640d. (8/28)
unix/hlib/mkiraf.csh
Set the default image storage directory to /u2 since it will be
empty when iraf is moved back to /iraf, and since there does not
seem to be any dedicated scratch area. Added a comment for the
pt100g graphics terminal. (8/28)
unix/hlib/zzsetenv.def
Changed the names of the stdgraph and terminal devices to `pt100g'.
Did not set stdplot, stdimage, printer, since no such devices are
currently available from the Alliant. (8/28)
local/login.cl
Ran `mkiraf' to set up a new CL login for IRAF. Tried starting the
CL and it hung up in pseudo-run mode as above. The problem is
definitely in the unix kernel, but it appears likely that the bug
occurs when an IRAF VOS (not HSI) process runs - possibly it is
related to the call to the internal Alliant `setcontext' routine
(which traps to the kernel), called from ZSVJMP. The system slows
way down when this occurs, so evidently it is hung in some sort of
tight kernel loop. (8/28)
(rebooted)
process spawn problem
This is turning out to be a hard problem to locate. ZSVJMP turned
out not to be the problem, and in fact it works fine. The difference
between the IRAF processes and the UNIX processes is that the IRAF
processes use the fancy vector compiler. The Alliant process header
contains a flag bit word describing the attributes of the process to
be run; the standard UNIX processes do not use any of the fancy
Alliant vector stuff, and in fact do not even use 68020 instructions.
The IRAF processes use 68020 instructions, vector instructions,
and something called multiple stacks. Once the kernel gets corrupted,
processes with these attributes enter the pseudo-run state when we try
to exec them. (8/29)
(rebooted countless times)
unix/os/zfiopr.c
After a lengthy battle, finally determined that due to some bug in
the Alliant kernel, ONLY A NORMAL PROCESS CAN EXEC A VECTOR PROCESS.
A vector process can exec a normal process with no problem, and a
normal process can exec a normal process, but if a vector process
execs a vector process the exec hangs in a tight kernel loop.
The workaround is for the vector process to exec a normal process
and have it turn around and exec the desired vector process.
I tried this, and it works, although there appear to be other less
serious bugs with IPC to be faced tomorrow. (8/29)
[8/30 - IPC bug was not a real bug, just caused by "-c" switch not
[being passed to connected subprocess by `execute'.]
unix/os/exec.c +
unix/hlib/exec.e +
unix/os/zfiopr.c
unix/os/mkpkg.csh
unix/os/mkpkg
Resolved the process connect problem as follows: [1] added a new
file exec.c (source for hlib$exec.e), which compiles into a nonvector
process to be called by the CL to spawn vector subprocesses;
[2] replaced the execl call in zfiopr.c/ZOPCPR by a call to execve
to spawn hlib$exec.e, which in turn spawns the IRAF suprocess.
Added entries to the mkpkg files to make the new modules. (8/30)
--------------------------------------
ALLIANT/IRAF is now up and ready for runtime testing, Saturday morning,
30 August. Spent two days on the port and one and a half days figuring
out the process connect problem.
unix/hlib/iraf.h
unix/hlib/mach.h
In checking out some operations upon indefinites, discovered that
the values of INDEFR and INDEFD in <iraf.h> had accidentally been
set to the values of EPSILON[RD]. This was causing INDEF comparison
failures for files that included <mach.h> since INDEF is also defined
there. INDEF should not be defined in <mach.h> if it is already
defined in <iraf.h>, so I deleted the entries in <mach.h> and restored
the old values to <iraf.h>. (8/30)
unix/as/zsvjmp.s
Discovered a minor problem with the new ZDOJMP routine. The address
of the error code was being returned, rather than the value, causing
error messages to come out as ERROR (*****, ".."). (8/30)
(full sysgen and relink due to <iraf.h> and zsvjmp edits)
Fatal Alliant hardware problem
Right away when trying to test out the IRAF science software I
ran into serious problems with floating point operations. A little
investigation showed that the Alliant floating point hardware is
faulty. Simple test programs were written in both Fortran and C to
print out the numbers 1.0, 2.0, 3.0: both failed. Testing of the
floating point instructions with ADB revealed that add and subtract
are ok, but 1.0 * 2.0 is 2.1375, and 1.0 / 2.0 is 0.53125. A simple
board swap should fix the problem (in fact it is probably a single
chip), but unfortunately this will prevent further testing of the
science software during this visit; virtually all programs that use
floating point produce invalid results, including all graphics
programs. Testing of the system software can continue, as can
execution of most benchmark programs. (8/30)
IMPORTANT NOTE -- Once this problem is fixed it will be necessary to
recompile the entire system (and any other non-IRAF software as well),
since any floating point decode operations performed by the compilers
will likely have failed, causing invalid floating point numbers to be
compiled into programs. Hence these programs will fail even after the
hardware is fixed.
unix/os/zopdpr.c
Had to make the same change here as in zfiopr.c, i.e., add a call to
the intermediate `exec.e' process to exec the bkg cl. Note that this
is not necessary for zoscmd, since zoscmd execs one of the unix
shells, both of which are nonvector processes. (8/31)
Note on FTP
vms/boot/rtar
A binary file transfer via FTP to VMS resulted in creation of a file
with an undefined record type. Trying to unpack this file with RTAR
would immediately crash the VAX due to an exexpected exception during
a system call in the ACP (RMS). This should not happen, of course,
but the real question is why FTP created a file with an undefined
record type. Sure would be nice to have the IRAF networking software
up... (9/1)
unix/os/zgtime.c
unix/hlib/libc/kernel.h (HZ)
sys/etc/sysptime.x
Rewrote the timer utility routines to use only integer arithmetic,
so that I could run some benchmarks of the vector hardware. (9/1)
(relink)
--------------------
Timing tests
The Alliant documentation claims that use of the vector hardware will
increase performance by about a factor of 4. This is borne out by my
tests. The factor of 4 is determined by the ratio of the startup
time for a vector segment versus the time required to execute a
vector segment, where the segment length (number of elements in a
vector register) is 32 for the Alliant.
aaddr, 512x512
vectorized: 0.184 cpu
nonvector: 0.617 cpu
(Moved new system to /iraf; deleted old system, it should be archived
(somewhere and probably won't be looked at again anyhow. I saved a copy
(of the original Alliant notes file as notes.den. Modified the links in
(/usr/include and /usr/bin to point to /iraf. Modified the pathnames in
(hlib and hlib/libc). (9/1)
cleanup
Ran (most of) the standard benchmarks. Deleted the /u2 version of
iraf. (9/2)
------------------------------
Back at NOAO. Problems reading tar file on VMS backup tape brought back from
DAO. This is probably due to problems with the DAO software so I shall
document it here (copied from noao/lyra notes file).
doc/ports/alliant_86.doc
Installed the notes file from the Alliant port. There was some
problem with the backup/tar file I made on the Alliant, hence it was
not easy to get the notes file off the tape. I had to use the new
SPLIT task to split the 24 Mb archive into 49 512000 byte segments,
and eventually determined that the notes file was at line 11115 of
segment 39! The problems with the tape are almost certainly not with
the tape itself, since I did a backup/compare at DAO, and backup did
not report any problems when the tape was read.
I think the most likely culprit is the FTP software, which had to be
used to move the archive to the VMS VAX, since the DAO Alliant did not
have a tape drive. FTP (binary mode) insisted on making a file with
an undefined VMS record type; this would cause RTAR to crash the VAX
if I tried to look at the file on the VMS VAX at DAO. The 24 Mb archive
file has one enormous section which is all zeroed, and then in the
remainder of the archive all ascii zeroes appear to have been deleted
from the archive, causing the 512 byte TAR file headers to be much
shorter. I tried the exact same operation (with a smaller test file)
using our Eunice FTP and everything worked fine. The DAO TELNET
also gave problems; it would hang up if fed too much data too fast,
and would occasionally crash with a stack trace. Based on these
experiences, I would certainly have to recommend the Wollongong
networking software over the other vendor. (9/6)
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