Fix argparse calls to better handle command line requests

1 files changed, 2 insertions, 3 deletions

diff --git a/test.py b/test.py
index 36506fa..0f84cea 100755
--- a/test.py
+++ b/test.py
@@ -4,7 +4,7 @@ import scilo
 
 def main():
     parser = argparse.ArgumentParser(description='Generate scientific workflow structure')
-    parser.add_argument('-c', '--copy-only', action='store_true', required=False,
+    parser.add_argument('-c', '--copy-only', default=True, action='store_false', required=False,
                         help='Do not move original data')
     parser.add_argument('-o', '--output-dir', type=str, required=True,
                         help='Where to store aggregated data, caches, results')
@@ -17,8 +17,7 @@ def main():
         exit(1)
     
     dataset = scilo.scilo(arguments.output_dir)
-    for f in arguments.input_files:
-        dataset.aggregate(f, arguments.copy_only)
+    dataset.aggregate(arguments.input_files, move=arguments.copy_only)
 
 if __name__ == "__main__":
     main()