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author | Automated <automated@example.com> | 2020-06-22 13:30:28 -0400 |
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committer | Automated <automated@example.com> | 2020-06-22 13:30:28 -0400 |
commit | fc528bfa3db28075ac2f94aa67c145a631913a8f (patch) | |
tree | bfbff7e18c6545b56a87c16f73f57fbded439ddc /jwstdp/0.16.2 | |
parent | 99612402c0c77e89a1bb6a5ec92716eb14ff3194 (diff) | |
download | astroconda-releases-testing-fc528bfa3db28075ac2f94aa67c145a631913a8f.tar.gz |
JWSTDP-0.16.2
Diffstat (limited to 'jwstdp/0.16.2')
-rw-r--r-- | jwstdp/0.16.2/README.md | 74 | ||||
-rw-r--r-- | jwstdp/0.16.2/conda_python_macos-stable-deps.txt | 20 | ||||
-rw-r--r-- | jwstdp/0.16.2/conda_python_stable-deps.txt | 23 | ||||
-rw-r--r-- | jwstdp/0.16.2/reqs_macos-stable-deps.txt | 32 | ||||
-rw-r--r-- | jwstdp/0.16.2/reqs_stable-deps.txt | 52 |
5 files changed, 201 insertions, 0 deletions
diff --git a/jwstdp/0.16.2/README.md b/jwstdp/0.16.2/README.md new file mode 100644 index 0000000..9b65481 --- /dev/null +++ b/jwstdp/0.16.2/README.md @@ -0,0 +1,74 @@ +# Installing the tested pipeline stack + +Conda (miniconda3 or anaconda3) must already be installed, if it is not, +'Advance Setup' below. +All steps must be performed in bash or a compatible shell. + +A fresh installation of Anaconda3 or Miniconda3 is not required for each JWSTDP +release. The method described here allows for multiple, entirely segregated, +pipeline installations. + +## Linux +To reproduce the environment used during JWST prerelease testing on Linux, a +three-step installation process is required. + +1) Install the target python interpreter and its dependencies using conda, then +``` +$ conda create -n jwstdp-0.16.2 --file +https://ssb.stsci.edu/releases/jwstdp/0.16.2/conda_python_stable-deps.txt +``` + +2) Activate the environment +``` +$ source activate jwstdp-0.16.2 +``` + +3) Install the pipeline software packages on top using `pip`: +``` +$ pip install -r https://ssb.stsci.edu/releases/jwstdp/0.16.2/reqs_stable-deps.txt +``` + +## Macos +To reproduce the environment used during JWST prerelease testing on Linux, a +three-step installation process is required. + +1) Install the target python interpreter and its dependencies using conda, then +``` +$ conda create -n jwstdp-0.16.2 --file +https://ssb.stsci.edu/releases/jwstdp/0.16.2/conda_python_macos-stable-deps.txt +``` + +2) Activate the environment +``` +$ source activate jwstdp-0.16.2 +``` + +3) Install the pipeline software packages on top using `pip`: +``` +$ pip install -r https://ssb.stsci.edu/releases/jwstdp/0.16.2/reqs_macos-stable-deps.txt +``` + +# Advance setup + +If conda has not yet been installed, use the following steps to obtain +it, then use the procedure above to install the pipeline software. + +For detailed instructions of this step, please visit: http://docs.continuum.io/anaconda/install#linux-install + +**For Miniconda:** + +``` +$ wget +https://repo.continuum.io/miniconda/Miniconda3-Latest-Linux-x86_64.sh +$ bash Miniconda3-Latest-Linux-x86_64.sh +$ export PATH=$HOME/miniconda3/bin:$PATH +``` + +**For Anaconda (if preferred):** + +``` +$ wget +https://repo.continuum.io/archive/Anaconda3-2019.10-Linux-x86_64.sh +$ bash Anaconda3-2019.10-Linux-x86_64.sh +$ export PATH=$HOME/anaconda3/bin:$PATH +``` diff --git a/jwstdp/0.16.2/conda_python_macos-stable-deps.txt b/jwstdp/0.16.2/conda_python_macos-stable-deps.txt new file mode 100644 index 0000000..d4be60d --- /dev/null +++ b/jwstdp/0.16.2/conda_python_macos-stable-deps.txt @@ -0,0 +1,20 @@ +# This file may be used to create an environment using: +# $ conda create --name <env> --file <this file> +# platform: osx-64 +@EXPLICIT +https://repo.anaconda.com/pkgs/main/osx-64/ca-certificates-2020.1.1-0.conda +https://repo.anaconda.com/pkgs/main/osx-64/libcxx-10.0.0-1.conda +https://repo.anaconda.com/pkgs/main/osx-64/xz-5.2.5-h1de35cc_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/zlib-1.2.11-h1de35cc_3.conda +https://repo.anaconda.com/pkgs/main/osx-64/libffi-3.3-h0a44026_1.conda +https://repo.anaconda.com/pkgs/main/osx-64/ncurses-6.2-h0a44026_1.conda +https://repo.anaconda.com/pkgs/main/osx-64/openssl-1.1.1g-h1de35cc_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/tk-8.6.10-hb0a8c7a_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/libedit-3.1.20191231-haf1e3a3_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/readline-8.0-h1de35cc_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/sqlite-3.32.2-hffcf06c_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/python-3.7.7-hf48f09d_4.conda +https://repo.anaconda.com/pkgs/main/osx-64/certifi-2020.4.5.2-py37_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/setuptools-47.3.0-py37_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/wheel-0.34.2-py37_0.conda +https://repo.anaconda.com/pkgs/main/osx-64/pip-20.1.1-py37_1.conda diff --git a/jwstdp/0.16.2/conda_python_stable-deps.txt b/jwstdp/0.16.2/conda_python_stable-deps.txt new file mode 100644 index 0000000..9aa62ab --- /dev/null +++ b/jwstdp/0.16.2/conda_python_stable-deps.txt @@ -0,0 +1,23 @@ +# This file may be used to create an environment using: +# $ conda create --name <env> --file <this file> +# platform: linux-64 +@EXPLICIT +https://repo.anaconda.com/pkgs/main/linux-64/_libgcc_mutex-0.1-main.conda +https://repo.anaconda.com/pkgs/main/linux-64/ca-certificates-2020.1.1-0.conda +https://repo.anaconda.com/pkgs/main/linux-64/ld_impl_linux-64-2.33.1-h53a641e_7.conda +https://repo.anaconda.com/pkgs/main/linux-64/libstdcxx-ng-9.1.0-hdf63c60_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/libgcc-ng-9.1.0-hdf63c60_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/libffi-3.3-he6710b0_1.conda +https://repo.anaconda.com/pkgs/main/linux-64/ncurses-6.2-he6710b0_1.conda +https://repo.anaconda.com/pkgs/main/linux-64/openssl-1.1.1g-h7b6447c_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/xz-5.2.5-h7b6447c_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/zlib-1.2.11-h7b6447c_3.conda +https://repo.anaconda.com/pkgs/main/linux-64/libedit-3.1.20191231-h7b6447c_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/readline-8.0-h7b6447c_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/tk-8.6.10-hbc83047_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/sqlite-3.32.2-h62c20be_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/python-3.7.7-hcff3b4d_5.conda +https://repo.anaconda.com/pkgs/main/linux-64/certifi-2020.4.5.2-py37_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/setuptools-47.3.0-py37_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/wheel-0.34.2-py37_0.conda +https://repo.anaconda.com/pkgs/main/linux-64/pip-20.1.1-py37_1.conda diff --git a/jwstdp/0.16.2/reqs_macos-stable-deps.txt b/jwstdp/0.16.2/reqs_macos-stable-deps.txt new file mode 100644 index 0000000..cabe052 --- /dev/null +++ b/jwstdp/0.16.2/reqs_macos-stable-deps.txt @@ -0,0 +1,32 @@ +asdf==2.6.0 +astropy==4.0.1.post1 +attrs==19.3.0 +certifi==2020.4.5.2 +chardet==3.0.4 +crds==7.5.0.0 +Cython==0.29.20 +drizzle==1.13.1 +filelock==3.0.12 +gwcs==0.13.0 +idna==2.9 +importlib-metadata==1.6.1 +jsonschema==3.2.0 +jwst @ git+https://github.com/spacetelescope/jwst.git@0.16.2 +lxml==4.5.1 +numpy==1.19.0 +Parsley==1.3 +photutils==0.7.2 +pyparsing==2.4.7 +pyrsistent==0.16.0 +PyYAML==5.3.1 +requests==2.24.0 +scipy==1.5.0 +semantic-version==2.8.5 +six==1.15.0 +spherical-geometry==1.2.18 +stsci.image==2.3.3 +stsci.imagestats==1.6.2 +stsci.stimage==0.2.4 +tweakwcs==0.6.4 +urllib3==1.25.9 +zipp==3.1.0 diff --git a/jwstdp/0.16.2/reqs_stable-deps.txt b/jwstdp/0.16.2/reqs_stable-deps.txt new file mode 100644 index 0000000..7aa1179 --- /dev/null +++ b/jwstdp/0.16.2/reqs_stable-deps.txt @@ -0,0 +1,52 @@ +apipkg==1.5 +asdf==2.6.0 +astropy==4.0.1.post1 +attrs==19.3.0 +certifi==2020.4.5.2 +chardet==3.0.4 +ci-watson==0.5 +codecov==2.1.7 +coverage==5.1 +crds==7.5.0.0 +Cython==0.29.20 +drizzle==1.13.1 +execnet==1.7.1 +filelock==3.0.12 +gwcs==0.13.0 +idna==2.9 +importlib-metadata==1.6.1 +jplephem==2.9 +jsonschema==3.2.0 +jwst @ git+https://github.com/spacetelescope/jwst.git@0.16.2 +lxml==4.5.1 +more-itertools==8.4.0 +numpy==1.19.0 +packaging==20.4 +Parsley==1.3 +photutils==0.7.2 +pluggy==0.13.1 +psutil==5.7.0 +py==1.8.2 +pymssql==2.1.4 +pyparsing==2.4.7 +pyrsistent==0.16.0 +pytest==5.4.3 +pytest-cov==2.10.0 +pytest-doctestplus==0.7.0 +pytest-forked==1.1.3 +pytest-openfiles==0.5.0 +pytest-xdist==1.32.0 +PyYAML==5.3.1 +requests==2.24.0 +requests-mock==1.8.0 +scipy==1.5.0 +semantic-version==2.8.5 +six==1.15.0 +spherical-geometry==1.2.18 +stsci.image==2.3.3 +stsci.imagestats==1.6.2 +stsci.stimage==0.2.4 +tweakwcs==0.6.4 +urllib3==1.25.9 +wcwidth==0.2.4 +zipp==3.1.0 |