JWSTDP-1.9.3

5 files changed, 278 insertions, 0 deletions

diff --git a/jwstdp/1.9.3/README.md b/jwstdp/1.9.3/README.md
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+# Installing the tested pipeline stack
+
+Conda (miniconda3 or anaconda3) must already be installed, if it is not,
+'Advance Setup' below.
+All steps must be performed in bash or a compatible shell.
+
+A fresh installation of Anaconda3 or Miniconda3 is not required for each JWSTDP
+release. The method described here allows for multiple, entirely segregated,
+pipeline installations.
+
+## Linux
+To reproduce the environment used during JWST prerelease testing on Linux, a 
+three-step installation process is required.
+
+1) Install the target python interpreter and its dependencies using conda, then
+```
+$ conda create -n jwstdp-1.9.3 --file
+https://ssb.stsci.edu/releases/jwstdp/1.9.3/conda_python_stable-deps.txt
+```
+
+2) Activate the environment
+```
+$ source activate jwstdp-1.9.3
+```
+
+3) Install the pipeline software packages on top using `pip`:
+```
+$ pip install -r https://ssb.stsci.edu/releases/jwstdp/1.9.3/reqs_stable-deps.txt
+```
+
+## Macos
+To reproduce the environment used during JWST prerelease testing on Linux, a 
+three-step installation process is required.
+
+1) Install the target python interpreter and its dependencies using conda, then
+```
+$ conda create -n jwstdp-1.9.3 --file
+https://ssb.stsci.edu/releases/jwstdp/1.9.3/conda_python_macos-stable-deps.txt
+```
+
+2) Activate the environment
+```
+$ source activate jwstdp-1.9.3
+```
+
+3) Install the pipeline software packages on top using `pip`:
+```
+$ pip install -r https://ssb.stsci.edu/releases/jwstdp/1.9.3/reqs_macos-stable-deps.txt
+```
+
+# Advance setup
+ 
+If conda has not yet been installed, use the following steps to obtain
+it, then use the procedure above to install the pipeline software.
+
+For detailed instructions of this step, please visit: http://docs.continuum.io/anaconda/install#linux-install
+
+**For Miniconda:**
+
+```
+$ wget
+https://repo.continuum.io/miniconda/Miniconda3-Latest-Linux-x86_64.sh
+$ bash Miniconda3-Latest-Linux-x86_64.sh
+$ export PATH=$HOME/miniconda3/bin:$PATH
+```
+
+**For Anaconda (if preferred):**
+
+```
+$ wget
+https://repo.continuum.io/archive/Anaconda3-2019.10-Linux-x86_64.sh
+$ bash Anaconda3-2019.10-Linux-x86_64.sh
+$ export PATH=$HOME/anaconda3/bin:$PATH
+```
diff --git a/jwstdp/1.9.3/conda_python_macos-stable-deps.txt b/jwstdp/1.9.3/conda_python_macos-stable-deps.txt
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+++ b/jwstdp/1.9.3/conda_python_macos-stable-deps.txt
@@ -0,0 +1,21 @@
+# This file may be used to create an environment using:
+# $ conda create --name <env> --file <this file>
+# platform: osx-64
+# conda version: 4.10.1
+@EXPLICIT
+https://repo.anaconda.com/pkgs/main/osx-64/ca-certificates-2022.07.19-hecd8cb5_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/libcxx-14.0.6-h9765a3e_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/ncurses-6.3-hca72f7f_3.conda
+https://repo.anaconda.com/pkgs/main/noarch/tzdata-2022e-h04d1e81_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/xz-5.2.6-hca72f7f_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/zlib-1.2.12-h4dc903c_3.conda
+https://repo.anaconda.com/pkgs/main/osx-64/libffi-3.3-hb1e8313_2.conda
+https://repo.anaconda.com/pkgs/main/osx-64/openssl-1.1.1q-hca72f7f_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/readline-8.1.2-hca72f7f_1.conda
+https://repo.anaconda.com/pkgs/main/osx-64/tk-8.6.12-h5d9f67b_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/sqlite-3.39.3-h707629a_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/python-3.9.13-hdfd78df_2.conda
+https://repo.anaconda.com/pkgs/main/osx-64/certifi-2022.9.24-py39hecd8cb5_0.conda
+https://repo.anaconda.com/pkgs/main/noarch/wheel-0.37.1-pyhd3eb1b0_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/setuptools-63.4.1-py39hecd8cb5_0.conda
+https://repo.anaconda.com/pkgs/main/osx-64/pip-22.2.2-py39hecd8cb5_0.conda
diff --git a/jwstdp/1.9.3/conda_python_stable-deps.txt b/jwstdp/1.9.3/conda_python_stable-deps.txt
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index 0000000..dd5f35d
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+++ b/jwstdp/1.9.3/conda_python_stable-deps.txt
@@ -0,0 +1,26 @@
+# This file may be used to create an environment using:
+# $ conda create --name <env> --file <this file>
+# platform: linux-64
+# conda version: 22.11.1
+@EXPLICIT
+https://repo.anaconda.com/pkgs/main/linux-64/_libgcc_mutex-0.1-main.conda
+https://repo.anaconda.com/pkgs/main/linux-64/ca-certificates-2022.10.11-h06a4308_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/ld_impl_linux-64-2.38-h1181459_1.conda
+https://repo.anaconda.com/pkgs/main/linux-64/libstdcxx-ng-11.2.0-h1234567_1.conda
+https://repo.anaconda.com/pkgs/main/noarch/tzdata-2022g-h04d1e81_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/libgomp-11.2.0-h1234567_1.conda
+https://repo.anaconda.com/pkgs/main/linux-64/_openmp_mutex-5.1-1_gnu.conda
+https://repo.anaconda.com/pkgs/main/linux-64/libgcc-ng-11.2.0-h1234567_1.conda
+https://repo.anaconda.com/pkgs/main/linux-64/libffi-3.4.2-h6a678d5_6.conda
+https://repo.anaconda.com/pkgs/main/linux-64/ncurses-6.3-h5eee18b_3.conda
+https://repo.anaconda.com/pkgs/main/linux-64/openssl-1.1.1s-h7f8727e_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/xz-5.2.8-h5eee18b_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/zlib-1.2.13-h5eee18b_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/readline-8.2-h5eee18b_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/tk-8.6.12-h1ccaba5_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/sqlite-3.40.1-h5082296_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/python-3.9.15-h7a1cb2a_2.conda
+https://repo.anaconda.com/pkgs/main/linux-64/certifi-2022.12.7-py39h06a4308_0.conda
+https://repo.anaconda.com/pkgs/main/noarch/wheel-0.37.1-pyhd3eb1b0_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/setuptools-65.6.3-py39h06a4308_0.conda
+https://repo.anaconda.com/pkgs/main/linux-64/pip-22.3.1-py39h06a4308_0.conda
diff --git a/jwstdp/1.9.3/reqs_macos-stable-deps.txt b/jwstdp/1.9.3/reqs_macos-stable-deps.txt
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+++ b/jwstdp/1.9.3/reqs_macos-stable-deps.txt
@@ -0,0 +1,58 @@
+asdf==2.13.0
+asdf-astropy==0.2.2
+asdf-coordinates-schemas==0.1.0
+asdf-standard==1.0.3
+asdf-transform-schemas==0.3.0
+asdf-wcs-schemas==0.1.1
+astropy==5.1
+attrs==22.1.0
+BayesicFitting==3.0.1
+certifi==2022.5.18.1
+charset-normalizer==2.1.1
+contourpy==1.0.5
+crds==11.16.14
+cycler==0.11.0
+drizzle==1.13.6
+filelock==3.8.0
+fonttools==4.37.4
+future==0.18.2
+gwcs==0.18.2
+idna==3.4
+imageio==2.22.2
+jmespath==1.0.1
+jsonschema==4.9.1
+jwst==1.9.3
+kiwisolver==1.4.4
+lxml==4.9.1
+matplotlib==3.6.1
+networkx==2.8.7
+numpy==1.23.4
+opencv-python==4.6.0.66
+packaging==21.3
+Parsley==1.3
+photutils==1.5.0
+Pillow==9.2.0
+poppy==1.0.3
+psutil==5.9.2
+pyerfa==2.0.0.1
+pyparsing==3.0.9
+pyrsistent==0.18.1
+python-dateutil==2.8.2
+PyWavelets==1.4.1
+PyYAML==6.0
+requests==2.28.1
+scikit-image==0.19.3
+scipy==1.9.2
+semantic-version==2.10.0
+six==1.16.0
+spherical-geometry==1.2.22
+stcal==1.2.1
+stdatamodels==0.4.3
+stpipe==0.4.2
+stsci.image==2.3.5
+stsci.imagestats==1.6.3
+stsci.stimage==0.2.5
+tifffile==2022.10.10
+tweakwcs==0.8.0
+urllib3==1.26.12
+wiimatch==0.3.1
diff --git a/jwstdp/1.9.3/reqs_stable-deps.txt b/jwstdp/1.9.3/reqs_stable-deps.txt
new file mode 100644
index 0000000..df31ed0
--- /dev/null
+++ b/jwstdp/1.9.3/reqs_stable-deps.txt
@@ -0,0 +1,99 @@
+alabaster==0.7.12
+asdf==2.14.3
+asdf-astropy==0.3.0
+asdf-coordinates-schemas==0.1.0
+asdf-standard==1.0.3
+asdf-transform-schemas==0.3.0
+asdf-unit-schemas==0.1.0
+asdf-wcs-schemas==0.1.1
+astropy==5.2.1
+attrs==22.2.0
+Babel==2.11.0
+BayesicFitting==3.0.1
+certifi==2022.12.7
+charset-normalizer==2.1.1
+ci-watson==0.6.1
+codecov==2.1.12
+colorama==0.4.6
+contourpy==1.0.6
+coverage==7.0.2
+crds==11.16.18
+cycler==0.11.0
+docutils==0.19
+drizzle==1.13.6
+et-xmlfile==1.1.0
+exceptiongroup==1.1.0
+execnet==1.9.0
+filelock==3.9.0
+fonttools==4.38.0
+future==0.18.2
+gwcs==0.18.3
+idna==3.4
+imageio==2.23.0
+imagesize==1.4.1
+importlib-metadata==6.0.0
+iniconfig==1.1.1
+Jinja2==3.1.2
+jmespath==1.0.1
+jplephem==2.18
+jsonschema==4.17.3
+jwst==1.9.3
+kiwisolver==1.4.4
+lxml==4.9.2
+MarkupSafe==2.1.1
+matplotlib==3.6.3
+networkx==2.8.8
+numpy==1.24.1
+numpydoc==1.5.0
+openpyxl==3.0.10
+packaging==22.0
+Parsley==1.3
+photutils==1.6.0
+Pillow==9.4.0
+pluggy==1.0.0
+poppy==1.0.3
+psutil==5.9.4
+pyerfa==2.0.0.1
+Pygments==2.14.0
+pymssql==2.2.7
+pyparsing==3.0.9
+pyrsistent==0.19.3
+pysiaf==0.19.1
+pytest==7.2.0
+pytest-cov==4.0.0
+pytest-doctestplus==0.12.1
+pytest-openfiles==0.5.0
+pytest-xdist==3.1.0
+python-dateutil==2.8.2
+pytz==2022.7
+PyWavelets==1.4.1
+PyYAML==6.0
+readchar==4.0.3
+requests==2.28.1
+requests-mock==1.10.0
+ruff==0.0.219
+scikit-image==0.19.3
+scipy==1.9.3
+semantic-version==2.10.0
+six==1.16.0
+snowballstemmer==2.2.0
+spherical-geometry==1.2.23
+Sphinx==6.1.3
+sphinxcontrib-devhelp==1.0.2
+sphinxcontrib-htmlhelp==2.0.0
+sphinxcontrib-jsmath==1.0.1
+sphinxcontrib-qthelp==1.0.3
+sphinxcontrib-serializinghtml==1.1.5
+sphinxcontrib.applehelp==1.0.3
+stcal==1.3.2
+stdatamodels==0.4.5
+stpipe==0.4.5
+stsci.image==2.3.5
+stsci.imagestats==1.6.3
+stsci.stimage==0.2.6
+tifffile==2022.10.10
+tomli==2.0.1
+tweakwcs==0.8.1
+urllib3==1.26.13
+wiimatch==0.3.1
+zipp==3.11.0