1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
|
import std.getopt;
import std.stdio;
import std.array;
import std.format;
import std.file;
import std.typecons;
import std.path : buildPath, chainPath, absolutePath;
import conda;
import merge;
import session;
int main(string[] args) {
string output_dir = "delivery";
string installer_prefix = "miniconda";
string installer_variant = "3";
string installer_version = "4.5.12";
string dumpfile_yaml;
string dumpfile_explicit;
string dumpfile_freeze;
string configfile;
// disable buffering
stdout.setvbuf(0, _IONBF);
stderr.setvbuf(0, _IONBF);
try {
arraySep = ","; // set getopt.arraySep. allows passing multiple
// args as comma delimited strings.
auto optargs = getopt(
args,
config.passThrough,
config.required, "config", "dm yaml configuration", &configfile,
"output-dir|o", "store delivery-related results in dir", &output_dir,
"install-prefix|p", "path to install miniconda", &installer_prefix,
"install-variant", "miniconda Python variant", &installer_variant,
"install-version|i", "version of miniconda installer", &installer_version,
);
if (optargs.helpWanted) {
defaultGetoptPrinter("Create reproducible pipeline deliveries",
optargs.options);
return 0;
}
} catch (GetOptException e) {
writeln(e.msg);
return 1;
}
Session_t session = getconf(configfile);
installer_prefix = buildPath(installer_prefix).absolutePath;
output_dir = buildPath(output_dir, session.delivery).absolutePath;
dumpfile_yaml = buildPath(output_dir, session.delivery ~ ".yml");
dumpfile_explicit = buildPath(output_dir, session.delivery ~ ".txt");
dumpfile_freeze = buildPath(output_dir, session.delivery ~ ".pip");
if (installer_variant != "3") {
writeln("Python 2.7 has reached end-of-life.");
writeln("3.x variant will be used instead.");
installer_variant = "3";
}
if (session.conda_channels.empty) {
session.conda_channels = [
"http://ssb.stsci.edu/astroconda",
"defaults",
"http://ssb.stsci.edu/astroconda-dev"
];
}
Conda conda = new Conda();
conda.channels = session.conda_channels;
conda.install_prefix = installer_prefix;
conda.installer_version = installer_version;
conda.installer_variant = installer_variant;
if (!conda.installer()) {
writeln("Installation failed.");
return 1;
}
conda.initialize();
if (conda.env_exists(session.delivery)) {
writefln("Environment '%s' already exists. Removing.", session.delivery);
conda.run("env remove -n " ~ session.delivery);
}
if (!env_combine(session, conda)) {
writeln("Delivery merge failed!");
return 1;
}
if (!output_dir.exists) {
writeln("Creating output directory: " ~ output_dir);
output_dir.mkdirRecurse;
}
writeln("Creating YAML dump: " ~ dumpfile_yaml);
conda.dump_env_yaml(dumpfile_yaml);
writeln("Creating explicit dump: " ~ dumpfile_explicit);
conda.dump_env_explicit(dumpfile_explicit);
writeln("Creating pip-freeze dump: " ~ dumpfile_freeze);
conda.dump_env_freeze(dumpfile_freeze);
if (session.run_tests) {
int failures = 0;
string testdir = buildPath(output_dir, "testdir");
testable_t[] pkgs = testable_packages(conda, session.conda_requirements);
foreach (pkg; pkgs) {
failures += integration_test(session, conda, testdir, pkg);
}
if (failures) {
writefln("\n%d of %d integration tests failed!", failures, pkgs.length);
}
}
writefln("done!");
return 0;
}
|