aboutsummaryrefslogtreecommitdiff
path: root/condor_split.py
diff options
context:
space:
mode:
Diffstat (limited to 'condor_split.py')
-rwxr-xr-xcondor_split.py89
1 files changed, 78 insertions, 11 deletions
diff --git a/condor_split.py b/condor_split.py
index faf08d8..480c94d 100755
--- a/condor_split.py
+++ b/condor_split.py
@@ -3,10 +3,15 @@ import argparse
import os
import sys
import fnmatch
+import shutil
+import tempfile
-def path_dive(p, ext, strip_components):
+VERBOSE = False
+
+def path_search(p, ext, strip_components):
filenames = []
p = os.path.abspath(p)
+ index = 1
for root, _, files in os.walk(p):
for f in files:
path = os.path.join(root, f)
@@ -20,29 +25,91 @@ def path_dive(p, ext, strip_components):
components = head.split(os.path.sep)[strip_components:]
path = os.path.join(os.path.sep.join(components), tail)
else:
- #strip_components = strip_max
+ # strip_components = strip_max
print("Warning: Cannot strip {} components from {} (max {})".format(strip_components, path, strip_max))
+
+ if VERBOSE:
+ print("[{}]:{}".format(index, path))
filenames.append(path)
+ index += 1
return filenames
-def assign_chunk():
- pass
+def generate_manifest(manifest):
+ dest = tempfile.NamedTemporaryFile("w+", delete=False)
+ for line in manifest:
+ dest.write(line + os.linesep)
+ return dest.name
+
+def assign_chunks(manifest, chunks, output_dir, as_jobs=False):
+ label = 0
+ count = 0
+ written = 0
+ # max_chunks = 0
+ dest = None
+ output_dir = os.path.abspath(output_dir)
+
+ if VERBOSE:
+ print("Output directory: {}".format(output_dir))
+
+ if not os.path.exists(output_dir):
+ os.makedirs(output_dir)
+ else:
+ shutil.rmtree(output_dir)
+ os.makedirs(output_dir)
+
+ if as_jobs:
+ manifest_count = len(file(manifest, 'r').readlines())
+ max_chunks = manifest_count / chunks
+ chunks = max_chunks
+
+
+ for line in open(manifest, 'r'):
+ line = line.strip(os.linesep)
+ line += " "
+ if count % chunks == 0:
+ if dest:
+ dest.close()
+ if VERBOSE:
+ print("[{}]: {}, {} entries".format(label, os.path.basename(dest.name), written))
+ written = 0
+ dest = file(os.path.join(output_dir, "stdin." + str(label)), 'w')
+ label += 1
+ dest.write(line)
+ count += 1
+ written += 1
+ os.unlink(manifest)
+
def main():
parser = argparse.ArgumentParser()
- parser.add_argument("search_path", action="store", help="Directory to search under")
parser.add_argument("--strip-components", default=0, type=int, help="Top-level directories to strip")
parser.add_argument("--output-dir", default="input")
- parser.add_argument("--extension", default="*.*", help="Extension of files")
- parser.add_argument("--chunks", default=4, help="Number of entries per file")
+ parser.add_argument("--extension", default="*.*", type=str, help="Extension of files")
+ parser.add_argument("--chunks", default=1, type=int, help="Number of entries per file")
+ parser.add_argument("--as-jobs", action="store_true", help="Number of expected jobs")
+ parser.add_argument("--verbose", action="store_true")
+ parser.add_argument("search_path", action="store", type=str, help="Directory to search under")
args = parser.parse_args()
- paths = path_dive(args.search_path, args.extension, args.strip_components)
- print("{} files".format(len(paths)))
- if not paths:
- exit(0)
+ global VERBOSE
+ VERBOSE = args.verbose
+ chunks = args.chunks
+ if chunks < 1:
+ chunks = 1
+ index_at = 0
+ files = path_search(args.search_path, args.extension, args.strip_components)
+ if files:
+ index_at = 1
+
+ if VERBOSE:
+ print("{} files".format(len(files)))
+
+ if not files:
+ exit(0)
+ manifest = generate_manifest(files)
+ assign_chunks(manifest, chunks, args.output_dir, as_jobs=args.as_jobs)
if __name__ == "__main__":
main()